Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0946 ATGAGGGGTGGGAGGAGTATGATGAAGCTTCAGTTTAGCAAGATCTACTCCTTTGCCTGTGGCAAACCAACCTTCAAGAGGGATCACTCCCAGATTGGGGGACAGCGTCATTCCAGGGTGGTTTTCTGCAATGAACCTGATAGATTTGAGGCTTTGAATTATGCTGATAATTCTGTTAGGTCCACAAAATACACTGTTGCCACTTTCTTGCCCAAGTCACTATTTGAGCAGTTCAGGAGGGTTGCTAATTTCTATTTCTTAGTGGCTGGCATCTTAGCCTTCACAAAGCTTGCTCCTTATACAGCTGTCAGTGCTATCCTTCCTCTGTCAATCATCATTGGAGCAACTATGGTGAAAGAGGGTATTGAAGATTGGCGTAGGAAAAAGCAGGATATTGAGGTGAACAATAGAAGAGTTATGTTGCATAAAGGTGATGGCAATTTTGAATATACTAAATGGAAGAATTTGAGAGTGGGGAGTATAGTGAAGATAATGAAGGATGAATTCTTCCCTGCTGACCTCCTACTGCTTTCGTCCAGTTATGAGGATGCAGTTTGTTATGTTGAGACCATGAACTTGGATGGTGAGACAAATTTGAAGTTAAAACAAGGGTTAGATGTAACTTCTTCTTTACACGAGGACATCCAATTTTGTGATTTTAGAGCTGTCATCAAATGTGAAGACCCAAATGCAAATTTATACTCATTTGTTGGAAGCATGGAGTTTGGAGAGCAAAAATATCCCCTTTCTGCGCAGCAACTTCTTCTGAGAGACTCTAAACTTCGTAATACCGACTACATATATGGAGCAGTCATATTTACTGGTCATGACACAAAGGTCATTCAAAACTCCACTGATCCTCCTTCTAAAAGAAGCAAAATTGAAAAGAAGATGGATAAGATTATCTACTTCTTGTTTTGTGTTTTATTTCTAATTGCATTTGTTGGATCTATCCTCTTTGGCATTGCAACCAAGAGTGACCTGGACAATGGGTCGATGAAAAGATGGTATCTAAGACCAGATAATTCCACAATTTTCTTCGATCCAGAAAGAGCAACTGTGGCTGCTATATGTCATTCTTTAACAGCTTTAATGTTATACAACTTCTTCATTCCTATTTCCTTGTATTTCTCAATAGAAATGGTCAAAGTTCTTCAGAGCATCTTCATCAATCAAGATATCCATATGTACTATGAAGAAGCAAACAAACCAGCTCGTGCTCGTACTTCAAACTTGAATGAGGAACTTGGCCAAGTTGACACAATACTTTCTGATAAAACTGGAACTCTGACATGCAACTCAATGGAGTTCATTAAATGTTCTGTTGCTGGGGTAGCTTATGGCTGTGGTGTGACGGAGGTTGAGCAAGCCATCAGTAGAATTAATGGTTCACCTATGATTCATGAGCATGTTGATAATAGATTAGAATCAAAAACATATGTCAAAGGTTTTAACTTTACAGATGCAAGGATAATGAATGGTAACTGGGTTAATGAGCTGCATGCAGATGTTATCCAGAAATTTTTTCGCTTATTGGCAATCTGTCATACTGCCATACCAGAAATGGATGCAGACACAGGAAATGTCTCATATGAGGCTGAGTCTCCGGATGAAGCAGCATTTGTGATTGCTGCAAGAGAAGTTGGTTTTAAATTCTACAAACGGACTCAGACTTGTTTATCAATGTATGAGTTGGATCCACTTTCCGGCAATGAAGTTGAAAGGACGTACATGATTCTCAATGTTTTAGAATTCAATAGCTCAAGGAAGCGAATGTCAGTGATAGTGAAAGATGAGGAAGGGAGAATTTTGCTACTCTGTAAGGGTGCTGACAGTGTCATGTTTGAAAGGCTTGCCAAGAATGGGAGGGAGTTTGAAGAGAAAACTTTGGAACATGTGCGTGAATATGCTGATGCAGGTCTAAGGACCCTCATACTGGCGTATTGTGAACTTGATGAAGAAGAATATGAGGTGTTTGATAAAAAATTTTATGAAGTGAAAAATTCAGTTACTGCAGACCGGGAAACACTAATTGAGGAAATATCTGATAAGATTGAGAGGAATCTAATCCTTTTGGGTGCCACTGCTGTTGAGGACAAGCTCCAAAATGGGGTTTCTGATTGTATTGACAAGCTTTCCCAAGCAAAAATTAAGATTTGGGTCTTGACCGGGGATAAAATGGAGACTGCCATCAATATTGGTTTCTCTTGTAGCTTGCTTAGACAAGGAATGAAACAGATTATAATTCATTTGGATATTCCAGAAATTCAATCGCTGGAGAAGGTTGGAGACAAGATGGCTATTGCCAAGTTTCCTATCTTATACCAAGAGGGTGTGCAAAACATCCTCTTTAGCTGGCGTCGAATACTCAGCTGGATGTTTAATGGATTTATTAGTGCCACAATGATATTCTTCTTCTGCACAAAAGCATTGGAGCCTCAAGCCTTTGATAAGGAGGGAAGAACTGCTGGAAGGGATATGCTGGGAGCAACGATGTATACTTGCGTGGTTTGGGTTGTGAACTTGCAGATGGCACTTGCTATACGTTACTTCACCTTGATACAACATATTTTCATATGGGGTTCCATTGCTTACTGGTATCTTATCCTCCTGGCATATGGAGCAATGCCTCCATTCATTTCTACAAATGCTTACAAAGTCTTCATTGAAACTCTCGCCCCGGCTCCTTCCTTTTGGATTGTGACATTCTTTGTGGCGATCTCAACACTAATACCATACTTCTCATTCTCAGCAATTCAGATGTGGTTCTTCCCCATGTATCACCAAATGGTACAATGGATAAGGCATGAGAGGAGGACAAATGATTCTTCATAG 2835 0.3989 MRGGRSMMKLQFSKIYSFACGKPTFKRDHSQIGGQRHSRVVFCNEPDRFEALNYADNSVRSTKYTVATFLPKSLFEQFRRVANFYFLVAGILAFTKLAPYTAVSAILPLSIIIGATMVKEGIEDWRRKKQDIEVNNRRVMLHKGDGNFEYTKWKNLRVGSIVKIMKDEFFPADLLLLSSSYEDAVCYVETMNLDGETNLKLKQGLDVTSSLHEDIQFCDFRAVIKCEDPNANLYSFVGSMEFGEQKYPLSAQQLLLRDSKLRNTDYIYGAVIFTGHDTKVIQNSTDPPSKRSKIEKKMDKIIYFLFCVLFLIAFVGSILFGIATKSDLDNGSMKRWYLRPDNSTIFFDPERATVAAICHSLTALMLYNFFIPISLYFSIEMVKVLQSIFINQDIHMYYEEANKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGVAYGCGVTEVEQAISRINGSPMIHEHVDNRLESKTYVKGFNFTDARIMNGNWVNELHADVIQKFFRLLAICHTAIPEMDADTGNVSYEAESPDEAAFVIAAREVGFKFYKRTQTCLSMYELDPLSGNEVERTYMILNVLEFNSSRKRMSVIVKDEEGRILLLCKGADSVMFERLAKNGREFEEKTLEHVREYADAGLRTLILAYCELDEEEYEVFDKKFYEVKNSVTADRETLIEEISDKIERNLILLGATAVEDKLQNGVSDCIDKLSQAKIKIWVLTGDKMETAINIGFSCSLLRQGMKQIIIHLDIPEIQSLEKVGDKMAIAKFPILYQEGVQNILFSWRRILSWMFNGFISATMIFFFCTKALEPQAFDKEGRTAGRDMLGATMYTCVVWVVNLQMALAIRYFTLIQHIFIWGSIAYWYLILLAYGAMPPFISTNAYKVFIETLAPAPSFWIVTFFVAISTLIPYFSFSAIQMWFFPMYHQMVQWIRHERRTNDSS* 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0946 944 Pfam Phospholipid-translocating ATPase N-terminal 41 105 IPR032631 -
Apr1g0946 944 Pfam Phospholipid-translocating P-type ATPase C-terminal 766 925 IPR032630 -
Apr1g0946 944 Gene3D - 466 695 IPR023299 GO:0000166
Apr1g0946 944 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 769 942 - -
Apr1g0946 944 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 7 765 - -
Apr1g0946 944 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 7 765 - -
Apr1g0946 944 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 769 942 - -
Apr1g0946 944 ProSitePatterns E1-E2 ATPases phosphorylation site. 425 431 IPR018303 -
Apr1g0946 944 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 491 693 IPR023299 GO:0000166
Apr1g0946 944 SUPERFAMILY Calcium ATPase, transmembrane domain M 54 925 IPR023298 -
Apr1g0946 944 Gene3D - 115 285 - -
Apr1g0946 944 Gene3D - 696 769 IPR023214 -
Apr1g0946 944 SUPERFAMILY Calcium ATPase, transduction domain A 141 282 IPR008250 -
Apr1g0946 944 SUPERFAMILY HAD-like 411 741 IPR036412 -
Apr1g0946 944 Pfam Cation transport ATPase (P-type) 527 618 - -
Apr1g0946 944 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 54 753 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Apr1g0946 944 CDD P-type_ATPase_APLT_Dnf-like 56 747 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0946 Apr-Chr1 13610181 13624121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0946 768 942 Primary Pumps ATPases AT1G68710 64.571 2.44e-76 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0946 K01530 - gmx:100798329 1357.04