Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0939 ATGGGAAAAGACTCAAAGCCAAAGGAATCAGGAGGGAAGGGAAAGGGAAAACAGGCAGCAAGTGGAAGTGATGAGAATGCTTCTAAGGGAAAAGGAAAAGGTGGGAAAGGTGGAGATTCACTTGGTACTTGCACCTATGTCAAAGCAAGGCATGTTTTATGTGAGAAACAAGGTAAGATTAATGAAGCCTACAAGAAGCTGCAGGATGGTTGGCTTAGCAACGGAGATAAGGTCCCACCAGCTGAGTTTGCAAAGGTAGCTCAAGAGTATTCTGAATGTCCTTCAGGAAAGAAAGGCGGAGACCTTGGATGGTTTCCCCGAGGAAAGATGGCTGGACCATTTCAGGATGTTGCCTTCAGTACACCTATTGGAGCTACTAGCGCTCCTTTCAAATCAACGTATTCTCTTGGACTCTTAAGTGTTGTTATCTTGATTCCTTATAATTATTACATGAGCATCCATGCCCCTTCTCTTCTCCATTTAGGCAGAAGTGCTAATGTTTGCTTGAATGATGATGCAGGCATGGTTACCATATCATCTTATGTGAAGGAAGAAAGAACTAATACCTGA 570 0.4333 MGKDSKPKESGGKGKGKQAASGSDENASKGKGKGGKGGDSLGTCTYVKARHVLCEKQGKINEAYKKLQDGWLSNGDKVPPAEFAKVAQEYSECPSGKKGGDLGWFPRGKMAGPFQDVAFSTPIGATSAPFKSTYSLGLLSVVILIPYNYYMSIHAPSLLHLGRSANVCLNDDAGMVTISSYVKEERTNT* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0939 189 MobiDBLite consensus disorder prediction 1 40 - -
Apr1g0939 189 ProSitePatterns PpiC-type peptidyl-prolyl cis-trans isomerase signature. 83 103 IPR023058 -
Apr1g0939 189 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 44 143 IPR000297 GO:0003755
Apr1g0939 189 SUPERFAMILY FKBP-like 43 141 - -
Apr1g0939 189 Pfam PPIC-type PPIASE domain 47 135 - -
Apr1g0939 189 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 136 - -
Apr1g0939 189 PANTHER - 1 136 IPR043323 GO:0003677|GO:0003755|GO:0006364
Apr1g0939 189 Gene3D - 45 142 IPR046357 GO:0003755
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0939 47 142 Sulfurtransferasese or Rhodanese AT5G19370 31.250 8.43e-07 46.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0939 1 13425544 13428293 Apr1g0939 1 13425544 13428293 ECH