Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0923 ATGGAGAGTCAGCAAAACTCGTTTTGGAAGTCTAACTACGAAATTTATGAAAATCCATTTGCACAAACGTGCCAATTCTCTTCATATGATTGTTACAGGGATTATGCTAATGATTGGTATAGTTGGTCATACGAATTTCCCATGCAGTATAACAATCATGATGCTATTCCTTTTATGGAGAACAATTATCCTGACATTTTATATGAAACTATGCCAACTGAACCAACACCACTAAACATACAAGACTATGACTCTGTGTGGAACGAACTTGATCCGGGGCTTGATTCAGATACACCCGCATTTTCATTTTGCAACAATGGAGAAACTGTGAAGGAAATGAGGGAAGATTTGAAGAGTAAGCCATGCAGAGAAGACAAAAGCATGAGTCCCATAACGTTATCAAGGAACACCGTTTCTCAATACTTTTACATGCCCATATCACAAGCAGCAAAAGAGCTTAATGTGGGCCTCACACATTTGAAAAAGAGATGCAGGGAGTTAGGAATTCAGAGGTGGCCACACAGGAAGCTAATGAGCCTTCAAACCCTCATAAAGAATATTCAAGACCAAGGAGTGGAGGGACATGAAAGTTGTGAAAAAATAAGGAATGCAATTGAGATATTGGAGAAAGAAAAGAAGATGGTGGAGGAAATGCCAGATTTGCAACTTGAAGATAATACAAGAAGGCTTAGACAAGCTTGTTTTAAGGCTAACTACAAGAAGAGGAAACTCATGAGCGTTAGGGTGATGGAACCCCAGTCTTCTTCTCTCGATGTATTGACACACAAGGGGTGA 795 0.3962 MESQQNSFWKSNYEIYENPFAQTCQFSSYDCYRDYANDWYSWSYEFPMQYNNHDAIPFMENNYPDILYETMPTEPTPLNIQDYDSVWNELDPGLDSDTPAFSFCNNGETVKEMREDLKSKPCREDKSMSPITLSRNTVSQYFYMPISQAAKELNVGLTHLKKRCRELGIQRWPHRKLMSLQTLIKNIQDQGVEGHESCEKIRNAIEILEKEKKMVEEMPDLQLEDNTRRLRQACFKANYKKRKLMSVRVMEPQSSSLDVLTHKG* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0923 264 ProSiteProfiles RWP-RK domain profile. 114 201 IPR003035 -
Apr1g0923 264 Pfam RWP-RK domain 133 180 IPR003035 -
Apr1g0923 264 Coils Coil 198 218 - -
Apr1g0923 264 PANTHER PROTEIN RKD1-RELATED 36 255 - -
Apr1g0923 264 PANTHER PROTEIN RKD4 36 255 IPR044607 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0923 Apr-Chr1 12975150 12976281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0923 132 243 AtRKD Transcription Factor Family AT1G18790 67.257 2.23e-51 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Apr1g0923 RWP-RK 3.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0923 - - gmx:100782238 337.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0923 1 12975150 12976281 Apr1g0923 1 12975150 12976281 ECH