Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0914 ATGGCAGAGCAAAGCAAGGTGATCCTACACGGATTTTGGACTAGCCCTTTTGTGAAGAGGGTGGAATTGGCCCTTAATCTCAAGGGCATACCTTATGATTATGTGGAAGAAGACTTAGCAAACAAAAGTGATTTACTTCTCAAGTACAACCCGGTTCACAAGAAGGTACCTGTTCTTGTTCATAATGAAAAGCCTTTAGCTGAATCAATGGTGATCGTTGAGTATATTGATGAAACTTGGAACGATGGTCCTAAATTGCTTCCCAATGATCCATACAAAAGAGCCCAAGCTCGTTTCTGGTCTAAGTTCATGGAGGAACAGCTATTTGAGACCACTTTTCTAGTTTTCAAAACAGATGGAGAAGTGCAAAAAAAAGGGCTTGACGAACTGTACCAGAAACTGAATGTACTTGAAAATGGAATGAAGACCTTTTTGGAAGAAGGCAATACTGGTGTTGAAAACAATGCTGGAATCCTGGACTTAGTCTTCTGTTCCTTATTTGGCGCTTACAAGGTTCATGAAGAAGTTCTTGGCATAAAGCTCATAGTGCCAGATAAGTTTCCTTTGCTATTTTCTTGGTTGATGGCTATTGGTGAGCTTGAAGTAGTGAAAAAGGCAGCTCCTCCACATGAAAAATCAGTGGAAATCCTTCAGCGTTATAGGCAATCTGCACTAAAATCTTTTCCTGTAGCTTAA 696 0.4023 MAEQSKVILHGFWTSPFVKRVELALNLKGIPYDYVEEDLANKSDLLLKYNPVHKKVPVLVHNEKPLAESMVIVEYIDETWNDGPKLLPNDPYKRAQARFWSKFMEEQLFETTFLVFKTDGEVQKKGLDELYQKLNVLENGMKTFLEEGNTGVENNAGILDLVFCSLFGAYKVHEEVLGIKLIVPDKFPLLFSWLMAIGELEVVKKAAPPHEKSVEILQRYRQSALKSFPVA* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0914 231 PANTHER GLUTATHIONE S-TRANSFERASE U9-LIKE 1 225 - -
Apr1g0914 231 Gene3D Glutaredoxin 1 86 - -
Apr1g0914 231 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 223 IPR010987 -
Apr1g0914 231 SUPERFAMILY GST C-terminal domain-like 78 222 IPR036282 -
Apr1g0914 231 Coils Coil 127 147 - -
Apr1g0914 231 SFLD Main.3: Omega- and Tau-like 4 225 IPR045073 -
Apr1g0914 231 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 225 IPR045073 -
Apr1g0914 231 Gene3D - 87 227 - -
Apr1g0914 231 Pfam Glutathione S-transferase, N-terminal domain 6 78 IPR004045 -
Apr1g0914 231 CDD GST_N_Tau 7 80 - -
Apr1g0914 231 CDD GST_C_Tau 91 220 IPR045074 GO:0004364|GO:0006749
Apr1g0914 231 SFLD Main (cytGST) 4 225 - -
Apr1g0914 231 SUPERFAMILY Thioredoxin-like 6 108 IPR036249 -
Apr1g0914 231 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0914 Apr-Chr1 12642168 12643985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0914 3 227 Glutathione S-transferase Gene Family AT1G74590 45.333 6.44e-77 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0914 K00799 - gmx:547581 357.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0914 1 12642168 12643985 Apr1g0914 1 12642168 12643985 ECH