Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0911 ATGGAGGGAGGTGATGATTTCCACCACCACCATCACCACCGACAAAACTTCCCATTCCAACTCCTTGAAAAGAAAGAAGACCAAGAAGCCCCTTCTTCATGCTCCACCTCATCCCCATACCCATCCCTAGCCATCTCAGCCGAACCCTCCTCAACTTCAAACTCAACCCGATCCACCAACAACCAGCTCCTACCTGCACCCTCGGAACCCTCTCCCAAAAAACCGCCCCCAAAAAGAACTTCAACAAAAGACCGTCACACCAAAGTTGACGGCCGTGGCCGTCGAATTCGAATGCCAGCTCTCTGCGCCGCTAGAGTATTCCAGCTCACTCGTGAGCTGGGACACAAGTCTGACGGCGAGACCATAGAGTGGCTCCTCCAGCAGGCGGAGCCAGCCGTCATCGCCGCCACCGGCACCGGCACCATTCCCGCCAACTTCACATCCCTTAACATATCTTTACGAAGCTCCGGGTCCTCCATGTCTGTCCCCTCTCAGCTACGATCCACCTACTTCAACCCAAACTTTTCACTCCAACCTCGGAGAAGCTTGTTCTTAACCTCGGAGAACACTAACAATTCCACTACACTCCTCAATTTCCAATCCAACAACCCAATCTCCACCGGCATGTTTCAAGCCAAGCATGAATTGCGCGAAACGACGTCGTTGGACTTGTCGTCTGAGAACACTGAAGAAGGTTTGGGAAGGAAACGACGACCCGCGGAACAAGACTTATCCACGACTACACAACATCAAGTTGGAAGCTATTTCATGCAATCAAGCACTTCAGGGACAATTCCAGCGAGTCACGCTCAAATTCCCGCGAATATATGGATGGTAGCGAATTCAAATAGCCAAGGTTTGAGTGGTGAACCTCCTTTGTGGACATTCCCAGGGGTTAGTAACAGCGCTTTGTATAGAGGAACCGTGTCAAGTGGGTTGCATTTCATGAATTTTCCTACCCCTATGGCTTTGTTGCCCAGTCAACAATTAGGATCTTCTGGGATTGGTGGGGGAGGCAATATGAACGAAGGGCATTTGAGTATGCTTTCTGGGCTTAACCCTTATAGGACGGTGATCGGCGTTTCGGAGTCTCAGGCAAGTGGGTCACAGTCACATCATGGTGGAAGCGAGGATCGGCATGACAACACAAGTCACCATTCATAA 1164 0.5086 MEGGDDFHHHHHHRQNFPFQLLEKKEDQEAPSSCSTSSPYPSLAISAEPSSTSNSTRSTNNQLLPAPSEPSPKKPPPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSSMSVPSQLRSTYFNPNFSLQPRRSLFLTSENTNNSTTLLNFQSNNPISTGMFQAKHELRETTSLDLSSENTEEGLGRKRRPAEQDLSTTTQHQVGSYFMQSSTSGTIPASHAQIPANIWMVANSNSQGLSGEPPLWTFPGVSNSALYRGTVSSGLHFMNFPTPMALLPSQQLGSSGIGGGGNMNEGHLSMLSGLNPYRTVIGVSESQASGSQSHHGGSEDRHDNTSHHS* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0911 387 PANTHER TRANSCRIPTION FACTOR TCP14-LIKE 10 386 - -
Apr1g0911 387 MobiDBLite consensus disorder prediction 1 30 - -
Apr1g0911 387 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 10 386 IPR005333 GO:0003700
Apr1g0911 387 MobiDBLite consensus disorder prediction 373 387 - -
Apr1g0911 387 MobiDBLite consensus disorder prediction 1 95 - -
Apr1g0911 387 MobiDBLite consensus disorder prediction 31 67 - -
Apr1g0911 387 ProSiteProfiles TCP domain profile. 82 136 IPR017887 -
Apr1g0911 387 Pfam TCP family transcription factor 80 245 IPR017887 -
Apr1g0911 387 MobiDBLite consensus disorder prediction 363 387 - -
Apr1g0911 387 MobiDBLite consensus disorder prediction 218 251 - -
Apr1g0911 387 MobiDBLite consensus disorder prediction 76 95 - -
Apr1g0911 387 MobiDBLite consensus disorder prediction 229 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0911 Apr-Chr1 12452484 12455024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0911 58 381 TCP Transcription Factor Family AT3G47620 45.823 3.38e-65 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Apr1g0911 TCP 2.9e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0911 - - gmx:100809154 481.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0911 1 12452484 12455024 Apr9g3010 9 36954815 36957049 ECH
Apr1g0911 1 12452484 12455024 Apr1g0911 1 12452484 12455024 ECH