Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0905 ATGCTCCCATTTGCGAATCCATTGAACCCCAAACCAGAAAGGGGAAAAAAGCAAAATCAGAGAGACATGGATTCTCTGAAGATGATCAAAGGGTACGGCAAAGTACAACACGATCAAAGCCACCTCGAAGACCAACAACAACATCGTAACCCCAAATCCTCAAAACCCTTCATCGCCACCTTTTCCATCTTCGCCGTCCTCTTCCTCACTCTCACCGTCGCATTCGCCTTCGTTTCACTTGTCCACCACACCAGCACCGAGTCAAACCAACATCATCTCAACTCGGCCGACTCAATCCGAGTTGTTTGCAACGTGACTCGCTACCCCGCCTCCTGCCTCGCCGCCATCTCACCCTCCGCCAACGCCACCGACCCAGAAGCCATCCTCGCCCTCTCTCTACGCGCCTCCCTCCACGCGCTCTCCACGCTCGCTTCTTCGCTTGGAACCAAGGGACACGCGCTCGCCGATTGCAAAGACCTGATGGACGACGCGCTGAGTCGACTCAACGACTCGCTTTCGACGATGGCGGCGCCGCCGCTGACGGAGGCAAAGATCGCCGACGTCCAAACGTTGGTGAGCGCGTCCATGACGGATCAGCAAACATGCCTTGACGGGTTGGAAGAGGTGGGTGACGTGGCAGCTCTTGCGTATATGAAAAAATCGATGCAAAGGTGCAGTGAGTACACCAGTAACAGCTTAGCCATTGTTGCTAATATTCACAACTTGTTACGCCAATTCCATACTCCACTCCATTGA 756 0.541 MLPFANPLNPKPERGKKQNQRDMDSLKMIKGYGKVQHDQSHLEDQQQHRNPKSSKPFIATFSIFAVLFLTLTVAFAFVSLVHHTSTESNQHHLNSADSIRVVCNVTRYPASCLAAISPSANATDPEAILALSLRASLHALSTLASSLGTKGHALADCKDLMDDALSRLNDSLSTMAAPPLTEAKIADVQTLVSASMTDQQTCLDGLEEVGDVAALAYMKKSMQRCSEYTSNSLAIVANIHNLLRQFHTPLH* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0905 251 Gene3D Invertase/pectin methylesterase inhibitor family protein 93 240 IPR035513 -
Apr1g0905 251 PANTHER PECTINESTERASE 25 246 - -
Apr1g0905 251 TIGRFAM PME_inhib: pectinesterase inhibitor domain 69 240 IPR006501 GO:0004857
Apr1g0905 251 SMART PMEI_2 94 235 IPR006501 GO:0004857
Apr1g0905 251 Pfam Plant invertase/pectin methylesterase inhibitor 98 235 IPR006501 GO:0004857
Apr1g0905 251 MobiDBLite consensus disorder prediction 1 28 - -
Apr1g0905 251 MobiDBLite consensus disorder prediction 14 28 - -
Apr1g0905 251 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 98 240 IPR035513 -
Apr1g0905 251 CDD PMEI-like_3 102 241 - -
Apr1g0905 251 PANTHER PECTINESTERASE 1-LIKE 25 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0905 Apr-Chr1 12344882 12346089 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0905 23 251 Carbohydrate Esterase AT1G53840 34.510 7.94e-32 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0905 - - aprc:113852848 469.544