Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0885 ATGGAAATGGGTCATGTAGTGTGGGTGCTGTTGGTGATTTCAGCCACTGTTTTCTGCTCTTTATCTCTTGCTCTTACGCAAGACGGAATCGCGCTGCTGGAAATCAAAAGCACTTTGAATGACACAAGGAATGTTCTTAGCAACTGGCGAGAGTCTGATGAGTCTCATTGTACATGGATTGGTATCACTTGTCATCCTGGTGAACAACGAGTTCGCTCAATAAATTTACCTTATATGCAACTGGGGGGGATTATATCTCCCAGCATTGGCAAACTCAGTAGACTACATAGACTGGCACTTCATCAGAATGGCTTACATGGAATTATTCCCAATGAAATCAGCAATTGTACTGAGCTTAGAGCACTGTACTTGAGAGCTAATTACTTACAAGGGGGCATCCCATCAAATATTGGAAATCTTACTTATTTGCATATAATGGATTTATCAAGCAACTCATTAAAGGGTGCTATACCTTCTTCTATTGGCCGTCTTACACATTTGCGAGTTCTGAACTTGTCAACTAATTTCTTTTCTGGTGAAATCCCTGACATTGGAGTACTAAGCACCTTTGGGAAAAACGTGTTCATTGGGAATTTAGATCTTTGTGGGCGGCAAGTTCAGAAACCATGTCGGACATCACTTGGCTTCCCAGTGGTGCTGCCACATGCTGCAAGTGATGAAGCTGCAGTCCCTACCAAAAGATCTTCACATTACATGAAGTGGGTGCTAGTTGGTGCAATATCAATAATGGGCCTTGCACTTATTGTAACCCTTTCATTACTCTGGATTTGTTTGTTGTCAAAGAAGGAAAGAGCTGCTAGGAGATACATAGAAGTTAAGGATCAAGTCAATCCAGAATCAAGCACAAAACTCATCACCTTTCATGGTGATCTTCCATACCCATCATTTGAGATTATAGAAAAGTTGGAGTCTCTTGATGAAGATGATGTGGTAGGGTCTGGAGGATTTGGTACTGTTTACAGGATGGTGATGAATGATTGTGGTACATTTGCTGTTAAGAGGATTGATAGAGGTCGTGAAGGTTCTGATCAGGGGTTTGAAAGGGAACTAGAGATCTTAGGTAGCATCAAGCACATAAATCTAGTAAACTTGCGTGGTTATTGCAGACTCCCTTCTACTAAGCTTCTAATCTATGATTATTTGGCCATGGGAAGCTTAGATGATCTCTTGCATGAAAACATTGAACAATCACTGAATTGGAGTACTCGTCTAAAGATAGCCCTTGGTTCTGCCCGGGGTTTGGCTTACTTGCACCATGACTGCAGTCCAAAAATTGTGCACCGTGACATAAAATCCAGCAACATCCTTCTTGATGAAAACATGGAGCCTCGGGTCTCTGATTTTGGTCTTGCAAAGCTTTTGGTTGATGAAGATGCCCATGTTACAACAGTGGTTGCTGGCACATTTGGCTATTTGGCACCAGAGTATCTACAGAGTGGGAGAGCCACAGAGAAGTCAGATGTGTATAGTTTTGGAGTTCTATTGCTAGAGCTTGTTACTGGAAAGAGACCTACAGATCCTTCATTTGCAAAGAGAGGTGTAAATGTTGTTGGTTGGATGAACACCTTCCTGAGAGAAAATAAATTGGAAGATGTAGTAGACAAAAGGTGCACTGATGCAGATTGGGAATCTGTTGAAGTGATTGTTGATTTAGCAGCAAGTTGTACTGATGCAAACGCAGATGAACGTCCATCAATGAACCAAGTGTTACAGTTGCTGGAACAAGAGGTTATGTCTCCTTGCCCAAGTGATTTTTATGATTCACATTCAGACCACTCTTAA 1803 0.4165 MEMGHVVWVLLVISATVFCSLSLALTQDGIALLEIKSTLNDTRNVLSNWRESDESHCTWIGITCHPGEQRVRSINLPYMQLGGIISPSIGKLSRLHRLALHQNGLHGIIPNEISNCTELRALYLRANYLQGGIPSNIGNLTYLHIMDLSSNSLKGAIPSSIGRLTHLRVLNLSTNFFSGEIPDIGVLSTFGKNVFIGNLDLCGRQVQKPCRTSLGFPVVLPHAASDEAAVPTKRSSHYMKWVLVGAISIMGLALIVTLSLLWICLLSKKERAARRYIEVKDQVNPESSTKLITFHGDLPYPSFEIIEKLESLDEDDVVGSGGFGTVYRMVMNDCGTFAVKRIDRGREGSDQGFERELEILGSIKHINLVNLRGYCRLPSTKLLIYDYLAMGSLDDLLHENIEQSLNWSTRLKIALGSARGLAYLHHDCSPKIVHRDIKSSNILLDENMEPRVSDFGLAKLLVDEDAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPSFAKRGVNVVGWMNTFLRENKLEDVVDKRCTDADWESVEVIVDLAASCTDANADERPSMNQVLQLLEQEVMSPCPSDFYDSHSDHS* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0885 600 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Apr1g0885 600 Pfam Protein kinase domain 315 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g0885 600 ProSitePatterns Serine/Threonine protein kinases active-site signature. 432 444 IPR008271 GO:0004672|GO:0006468
Apr1g0885 600 SMART serkin_6 312 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g0885 600 Gene3D Phosphorylase Kinase; domain 1 276 387 - -
Apr1g0885 600 SUPERFAMILY L domain-like 25 206 - -
Apr1g0885 600 ProSiteProfiles Protein kinase domain profile. 312 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g0885 600 ProSitePatterns Protein kinases ATP-binding region signature. 318 340 IPR017441 GO:0005524
Apr1g0885 600 Gene3D Transferase(Phosphotransferase) domain 1 388 589 - -
Apr1g0885 600 SUPERFAMILY Protein kinase-like (PK-like) 292 581 IPR011009 -
Apr1g0885 600 PANTHER RECEPTOR-LIKE PROTEIN 55 2 599 - -
Apr1g0885 600 Gene3D Ribonuclease Inhibitor 25 212 IPR032675 -
Apr1g0885 600 PANTHER LRR RECEPTOR-LIKE KINASE 2 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0885 Apr-Chr1 11913291 11918542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0885 8 589 Receptor kinase-like Gene Family AT2G35620 49.571 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Apr1g0885 Pkinase 1.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0885 - - gmx:100783363 1108.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0885 1 11913291 11918542 Apr1g0885 1 11913291 11918542 ECH