Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0880 ATGGAGTGGGTGGCGAATCGGTGGACGGGGGTGGCCGCAGCGATATGGATCCAGTGGAGCTGCGGTGCATCGTACACCTTCAGCATCTACTCCCCTGTGCTCAAGTCCACGCAAGGCTACGATCAATCCACTCTCGACACCGTCTCTGTCTTCAAAGACATTGGTGCCAACTTCGGCGTCCTCTCGGGGCTCCTTTACTCCGCCGTTACCCCTTACAACCCCCCTGCCGGCGTCCCCGGCTCGCCGTCTAAGTCTAAATGGGCCTCTCTTGGTGGGCCCTGGGTGGTCGTCGCCGTTGGGGCCGTCCAGTGCTTTGTGGGCTTCATCTTCATATGGGCCTCCGTCGTGGGCCTGATTAGCCCGCCGCCTGTGCCCGTTATGTGCTTTTTCGCGTGGCTCGCCTCTAACGGTCAGACCTTCTTGAACACCACGAATGTCGTTACCGGTTTGCGCAATTTTCCCCAGTATAGCGGTACCATCATTGGCATCATGAAGGGCTTTCTTGGACTCAGTGGAGCTATCCTGATCCAAATCTACCATACCTTTTGTGATGGGGACCCAACAACCTACCTTCTTATGCTTGCTTGCTTGCCTGCATTCATATGTTTATTGCTTATGTTTTTACTGAGAATTTATGAAGTGCACGGTGGTGATTACAAGAAGCATCTAGATGGGTTCTCTGTGGTCACTGTGATTATTGTTGCTTATCTCATGTTCATAATAATTTTACAGAACTTCATTAGTTTGTCATATTGGGCACGGATGTTCATATTTGTAATCCTTATCTTTCTGCTAGCGTCACCTTTTGGTATTGCTACCAAAGCTCATTGGGAGGAGTCGCGGAAATTTGCACAATCGGATACCATTGAGAGGGCTCCTTCAGCAAACAAGGCCACTTCCTCCAAATATTCTCCATCAGGGGATGAAGTGACTTCAGATGACACATTGCCCCATGAAGAAGAAAAGAACCTCTTGCTAGCTATGTGTACAGTTGAATTTTGGATGTTGTTTGTGACCATGATATCAGGGTTGGGCTCTGGGCTGGCAACAATAAATAATATGAGCCAAATAGGGCAATCTCTTGGCTATAGTACTATTGAGATTAATAATATGGTGTCACTGTGGAGTATGTGGAATTTTCTTGGCCGCTTTGGAGGTGGTCATGTATCGGATTATATTATGCACAGAAAAGGTTGGCCGAGGCCCCTGTTGATGACTGCAACTCTGGGGACAATGATTATTGGGCATTTAATTATAGCTTCTGGTTTTCATGGAAATTTGTATCTTGGTCCTGTCCTAGTGGGCATCTGCTATGGTGCACATTGGTCCTTGATGCCTACAATCACTTCTGAGATATTTGGTGTAAAGCATATGGGTACCATTTTCAACACTATTGCAGCTGCGAGTCCATTTGGATCTTATATACTTTCTGTGAGAGTTGTGGGATATATATATGACATGCAAGCCGATGAAGATGATAACACATGCTTTGGAATCCACTGTTTCATGTCTTCGTTTTTTATCCTAGCAGGTGTGGCTTTTCTTGCATTTTTGGTTGGTCTGGCATTATACTTCCGGACCCGAAGGTTCTATAAGATAGTTGTGCTTAGAAGATTAAAACATTATGCAAGAAGATGA 1638 0.4634 MEWVANRWTGVAAAIWIQWSCGASYTFSIYSPVLKSTQGYDQSTLDTVSVFKDIGANFGVLSGLLYSAVTPYNPPAGVPGSPSKSKWASLGGPWVVVAVGAVQCFVGFIFIWASVVGLISPPPVPVMCFFAWLASNGQTFLNTTNVVTGLRNFPQYSGTIIGIMKGFLGLSGAILIQIYHTFCDGDPTTYLLMLACLPAFICLLLMFLLRIYEVHGGDYKKHLDGFSVVTVIIVAYLMFIIILQNFISLSYWARMFIFVILIFLLASPFGIATKAHWEESRKFAQSDTIERAPSANKATSSKYSPSGDEVTSDDTLPHEEEKNLLLAMCTVEFWMLFVTMISGLGSGLATINNMSQIGQSLGYSTIEINNMVSLWSMWNFLGRFGGGHVSDYIMHRKGWPRPLLMTATLGTMIIGHLIIASGFHGNLYLGPVLVGICYGAHWSLMPTITSEIFGVKHMGTIFNTIAAASPFGSYILSVRVVGYIYDMQADEDDNTCFGIHCFMSSFFILAGVAFLAFLVGLALYFRTRRFYKIVVLRRLKHYARR* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0880 545 Pfam Major Facilitator Superfamily 336 529 IPR011701 GO:0022857|GO:0055085
Apr1g0880 545 PANTHER F25A4.25 PROTEIN 3 542 - -
Apr1g0880 545 MobiDBLite consensus disorder prediction 286 315 - -
Apr1g0880 545 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 542 - -
Apr1g0880 545 SUPERFAMILY MFS general substrate transporter 5 210 IPR036259 -
Apr1g0880 545 CDD MFS_Mch1p_like 7 516 - -
Apr1g0880 545 ProSiteProfiles Major facilitator superfamily (MFS) profile. 331 545 IPR020846 GO:0022857
Apr1g0880 545 SUPERFAMILY MFS general substrate transporter 233 529 IPR036259 -
Apr1g0880 545 Pfam Nodulin-like 93 271 IPR010658 -
Apr1g0880 545 Pfam Nodulin-like 7 69 IPR010658 -
Apr1g0880 545 Gene3D MFS general substrate transporter like domains 321 543 IPR036259 -
Apr1g0880 545 MobiDBLite consensus disorder prediction 287 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0880 Apr-Chr1 11800890 11810029 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0880 1 541 Nodulin-like Gene Family AT1G74780 57.671 0.0 618
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0880 - - gmx:100799596 939.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0880 1 11800890 11810029 Apr1g0880 1 11800890 11810029 ECH