Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0879 ATGGAGTTTGCAAACTTGAATTTGTATCTGAACTCAAAGTGGTTATCGGTAGTGGCGAGCATATGGATTCAGTGCACCAGCGGATCACTCTATACTTTCTCCATCTACTCTCAAACTCTCAAGTCAACGCAGCACTACGATCAATCAACGCTCGACGTCGTTTCTGTTTCCAAAGACATCGGAGCTAACGTTGGGGTCCTCTCTGGCCTTATATACGATTTCTTCGCCCGAAGAACCACTGCTGGGCCTTGGCTCGTCCATTTCTTGGGCTTGGTCCAATGCTTCTTGGGCTATTTCCTCATGTGGGCCGCCGTCGCCGGGCTCTTTCCGCCGCTGCCCGTGCCTCTCATGTGCCTCTTCATGTTCGTGGCGGCTCATGCTCAGAGCTACTTTAACACTTCCAACGTTGTCACCGGCGTACATAATTTCCCTAATTACAGCGGAACCATCGTCGGCATTATGAAGGGATTTCTTGGTCTCAGTGGAGCAATATTAATTTTAGTGTATCGGACAATATTCAACAACAAGCCTACGTTGTATCTTCTGATGCTTGCACTCTTACCACCAATAAACACTTTGCTGCTTATGTGGTTTGTAAGAATCCATAAAACTCGTGGGGGAGAAGAAAGGAAGTACCTGAATGTGTTTTCTTTGATGGCTTTGGTTATTGCTGCATATCTTATGGTTGTTATAATTCTAGAGAACGTTGTTGGTCTGCAATCATTTGTCCGCATTTTTGTATTTGCTGTGCTCATGGTGTTGCTTGCCTCACTTTTTGGCATGGCATTTAAAGCACAAGAAAGAAACTCCAGTGGAACTTCGGAAAATTTTCTCGACGAGCAGTCCCAACTAATTGCGGAGTCAGGCCCTGAGAAGGTGGATGCAAGGGAAGATTCTTCCGACTACCCTTTTCCTGATTCTAACAATCAAAGGACTAGTTTGCAACAAGGAGAAAACCTGAACCTTATCCAAGCAGTGCAAACTGTGAACTTCTGGGTTTTGTTTATTTCTATGGCATTTGGTATGGGATCAGGCCTTGCAACAGTTAATAATTTGGGCCAAATAGGGGAATCCCTTGGTTATTCCAGCCATGAGACAGGTTCCTTGGTTTCTTTGTGGAGCATTTGGAATTTTCTTGGCCGTTTTGGAGCTGGTTATGTTTCAGATTATTTTTTACACACAAGAGGATGGGCAAGACCATTGTTTATGGTTAACACTTTAATGATCATGAGCATTGGTCATGTGGTGATTGCTTCTGGACTTCCTGGTGCTCTATATGGTGGTTCAATATTGGTGGGCATTTGTTATGGCTCTCAGTGGTCCCTAATGCCCACAATCACTTCTGAGATATTTGGTGTGGGACATATGGGCAGCATATTCAACACCATTACCATAGCAAATCCAGTGGGATCTTATATATTCTCTGTAAGAGTAGTTGGGTACATATATGACAAAGAAGCATCAGAAGGAAATACATGCATTGGAACTCATTGTTTTATGCTTTCTTTTCTCATAATGGCATCTGCCACTTTTCTGGGTTCTGTGACAGCTTTATGTTTGTTTTTGCGGACAAAAAACTTTTATGATCAGATTATACGGAGAAGAATTCAAAATGTTCGGTGA 1623 0.4319 MEFANLNLYLNSKWLSVVASIWIQCTSGSLYTFSIYSQTLKSTQHYDQSTLDVVSVSKDIGANVGVLSGLIYDFFARRTTAGPWLVHFLGLVQCFLGYFLMWAAVAGLFPPLPVPLMCLFMFVAAHAQSYFNTSNVVTGVHNFPNYSGTIVGIMKGFLGLSGAILILVYRTIFNNKPTLYLLMLALLPPINTLLLMWFVRIHKTRGGEERKYLNVFSLMALVIAAYLMVVIILENVVGLQSFVRIFVFAVLMVLLASLFGMAFKAQERNSSGTSENFLDEQSQLIAESGPEKVDAREDSSDYPFPDSNNQRTSLQQGENLNLIQAVQTVNFWVLFISMAFGMGSGLATVNNLGQIGESLGYSSHETGSLVSLWSIWNFLGRFGAGYVSDYFLHTRGWARPLFMVNTLMIMSIGHVVIASGLPGALYGGSILVGICYGSQWSLMPTITSEIFGVGHMGSIFNTITIANPVGSYIFSVRVVGYIYDKEASEGNTCIGTHCFMLSFLIMASATFLGSVTALCLFLRTKNFYDQIIRRRIQNVR* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0879 540 Pfam Major Facilitator Superfamily 334 524 IPR011701 GO:0022857|GO:0055085
Apr1g0879 540 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 539 - -
Apr1g0879 540 MobiDBLite consensus disorder prediction 288 311 - -
Apr1g0879 540 Gene3D MFS general substrate transporter like domains 321 527 IPR036259 -
Apr1g0879 540 CDD MFS_Mch1p_like 12 513 - -
Apr1g0879 540 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 9 539 - -
Apr1g0879 540 SUPERFAMILY MFS general substrate transporter 16 205 IPR036259 -
Apr1g0879 540 Pfam Nodulin-like 13 256 IPR010658 -
Apr1g0879 540 SUPERFAMILY MFS general substrate transporter 214 527 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0879 Apr-Chr1 11797168 11799574 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0879 10 538 Nodulin-like Gene Family AT1G74780 55.556 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0879 - - gmx:100814668 855.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0879 1 11797168 11799574 Apr1g0879 1 11797168 11799574 ECH