Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0877 ATGTCTCAAGGATCTCCCCCTCCACCACCACCTTCTCCTCCGCAAGACGCCAGCCAACCCTTGCCGGAACCCGATTCACGCAAGGAGGAAACCGCCGCCACCACCACCACCACCGGCGCCGCCGATGCCGCTGCCACAGTTCCTCCTGCCACTACCCGTACCCGCCCCTCCCGCGCCTGCACCATTCGCACTGCCGCACGGCTCTACGCGGCGTCGCAGCCGGCGATCGAGCGGAGGCCGAAGGCGGCGAAGAAGGAGGCGCGTCGCGAGAAGTCGCTGTCGCCGCAGCCTCAGCAATGCAGCAAGATCGTGACGGCGCTGGTGGAACCGCCTCCACCGGCGCAGTTGCCGCGCTATAACCTACGGTCAATGTGGGAGTTAGCTTCAATACTCAATTTCTTGCATCTGTTTAGGCCTCTTTTGAATATATCAGTAGAATTTTCTGCTGAAGAGTTTGAGACGGCTCTTCTCACCCCCAATGACACGTTGGGTGATATACATATGCCTTTGCTAAAGGCCATCCCTCCCATTACACGAATGGCACTCTCACGTGATACTTGGATAACTGTATTATGCAGAAAATTGAGAGATTGGTGGCATTGGGTAGCTGATGGGGATCTTCCTATTGTTGCTTCACATGGGGCGGAGGTTGAAGTCTATAAAGCACTTGATCCAGGGGTTCGTGTGGTCATCTTAAAAGCATTATGTGACATTCGTGTTGAGCAAGAAGATATCCGGAGTTACATTGACAACTCCCTCAAACATGGCGTTCAACTTTTGACATTCCGTAAGGAGCGTGTTGGTGGCGATTCTCACGGAATTTCTTATTGGTATGAAGATGACCCAATCATTGGTCATAGGTTATATCGGGAAATAAGGAAAACTGAAGTGGTTCAACTGAAGAAAGGGAAACCAAGGGGCTCCCAGGTTCTTTCTAATACATCATATCAGTGGGAAACAGTTGCTACCAATTTTGATGAATTTCAAGATGTTTCTGAGAAGCTTTTCTCAAGTAAAAACAGAACGGAGGCTTCTGTAGGGAAAAAGGTGAAGATAGACATGCTCCCTGAAATTGAGAAAGTTCACAAGAGAAAGGAAAGGTTGCTGAAAAAACAACACAGACAAGCTCTTCTTCTTGACAATTTCTTGGGTGTAGATGGGCTTGCCCCAGGGCGTTCACTTCGTGACCGGAAACCTGTTACCTACACTTTCGATGATTACGATCGATCCATCAATGAGGCAATTAAGATAACCAAACGGAAACCACCATCTCCAGAACCTATACTCGGCAGGAGAGAAGCAGGAGCAAAACCTGAAGCTTTAACTAATGGTAACTGGAGTGGTCCTTCACATGCACCTCAACATCTAAATTTTGATATGCCATCTCCTAAATCACCTGACTTTGATGATGTGGAGGAAGAGAATCAAAACGATGCATTGGATCGAAGCAATCGTAGAAGACAGAGGCCTAAAAGGTATTCAGAGAAAGAGTTTGTTGAAGCAGTATCAGACAATGAGGCTGACTTTGACAGTGATGATGATATTGTTGGAGAAGCTGTATATGATGAAGAATATCTCCGGAAACGTAAGCAGAGGAGGGTTTCTAGTAGCTCTGCCTCTGAAGGAGATGAAGAATATCATTGGGATGAAGATAATGTTGAAGAAGAAGAAGAAGATGATGAAGAAGATTCCTTAAGTGTTAGTGAAGATAGTGACAAGCCTCGTAAATTCAAGCAACTGTCAGGTCGTACTAGGAGGGAAACTAAACTCAGGTCTGTGGGTGAGATTCAATCAGGCCTGAGACGCAGTAAGAGGGCAACAAGAAACCGTATAAATTACCGACAGTACGACATGTCTGATTCAGAAACAGAGTTTATTATACCTGATAAGTCTAATGTATCAGATGAGCACTCAGAGCCTAGTGAGAATGGGGAATATATGATGGAAAGTGAAGATTCAGATGGAAACGATGATGAAGATCAAGAAACCAAAGTAGATGAGCCTGTTACTTATCCTGCAGAAGGAAACAGCCAATATCCTGCTGTAGAAGAGAATGAACAAAACCAAAATCAGCCTCCTGAAAAATCAAGTAGTCCTGGTCAGGAGGAAGTTGAGGGCACGGGAAAGAGACGTTTCCTTGATTTGAATGAGCTGGCTCCTAGCTCAGGTTTTGATGATGGTCCAAATACAACAACGAAAGATGAAGGCAATGATGATTACTGA 2223 0.4624 MSQGSPPPPPPSPPQDASQPLPEPDSRKEETAATTTTTGAADAAATVPPATTRTRPSRACTIRTAARLYAASQPAIERRPKAAKKEARREKSLSPQPQQCSKIVTALVEPPPPAQLPRYNLRSMWELASILNFLHLFRPLLNISVEFSAEEFETALLTPNDTLGDIHMPLLKAIPPITRMALSRDTWITVLCRKLRDWWHWVADGDLPIVASHGAEVEVYKALDPGVRVVILKALCDIRVEQEDIRSYIDNSLKHGVQLLTFRKERVGGDSHGISYWYEDDPIIGHRLYREIRKTEVVQLKKGKPRGSQVLSNTSYQWETVATNFDEFQDVSEKLFSSKNRTEASVGKKVKIDMLPEIEKVHKRKERLLKKQHRQALLLDNFLGVDGLAPGRSLRDRKPVTYTFDDYDRSINEAIKITKRKPPSPEPILGRREAGAKPEALTNGNWSGPSHAPQHLNFDMPSPKSPDFDDVEEENQNDALDRSNRRRQRPKRYSEKEFVEAVSDNEADFDSDDDIVGEAVYDEEYLRKRKQRRVSSSSASEGDEEYHWDEDNVEEEEEDDEEDSLSVSEDSDKPRKFKQLSGRTRRETKLRSVGEIQSGLRRSKRATRNRINYRQYDMSDSETEFIIPDKSNVSDEHSEPSENGEYMMESEDSDGNDDEDQETKVDEPVTYPAEGNSQYPAVEENEQNQNQPPEKSSSPGQEEVEGTGKRRFLDLNELAPSSGFDDGPNTTTKDEGNDDY* 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0877 740 PANTHER REMODELING AND SPACING FACTOR 1 33 739 IPR028938 GO:0006355|GO:0031213
Apr1g0877 740 PANTHER DDT DOMAIN-CONTAINING PROTEIN DDR4 33 739 - -
Apr1g0877 740 MobiDBLite consensus disorder prediction 568 592 - -
Apr1g0877 740 MobiDBLite consensus disorder prediction 629 644 - -
Apr1g0877 740 MobiDBLite consensus disorder prediction 1 20 - -
Apr1g0877 740 MobiDBLite consensus disorder prediction 504 519 - -
Apr1g0877 740 MobiDBLite consensus disorder prediction 645 664 - -
Apr1g0877 740 MobiDBLite consensus disorder prediction 415 740 - -
Apr1g0877 740 MobiDBLite consensus disorder prediction 477 503 - -
Apr1g0877 740 MobiDBLite consensus disorder prediction 520 543 - -
Apr1g0877 740 MobiDBLite consensus disorder prediction 544 567 - -
Apr1g0877 740 Pfam DDT domain 129 174 IPR018501 -
Apr1g0877 740 MobiDBLite consensus disorder prediction 1 100 - -
Apr1g0877 740 MobiDBLite consensus disorder prediction 680 703 - -
Apr1g0877 740 MobiDBLite consensus disorder prediction 78 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0877 Apr-Chr1 11739033 11748718 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Apr1g0877 DDT 5.4e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0877 - - gmx:100796430 1142.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0877 1 11739033 11748718 Apr1g0877 1 11739033 11748718 ECH
Apr9g3047 9 37269411 37278171 Apr1g0877 1 11739033 11748718 PCT