Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0864 ATGTCAGCCCCAAGTCATGCAATTGCAAAGGCTGTGGTTGCTACAGCTGGTGTTATGCTACTTATTGCTATGGTTTTTGTTTACTTCTTTCACAAATTTGTTCTTGCTCGATACCACCAGAGACACAAAGTTGCTGCAATTCTTCGAGAATCAGGAGTGAATCATGAGTATATAAAGAAAGTTGGTGGTAATGTGAAGGGACTAATTGTTGAAGAAAATGGGGTTGATATTCTTTATATGATGGAAACAGAAAGCAGGCAATTGATAACCGTATTCCCAAATAGTATAATCAATCCTAGTTTTGAAGAAGATGAAGAAGAAAAGAGAATAGATATAATGGTCCAAAGATCCAGACCATCCAAGCCTCAGATTCCTCTTGTACGTGAATCTCCAAGCTGGATTGGCCATGAAAATCTAGTGAAACCACTATCACAAATATCAACTCTACCATCTTCAGTTTCATCATCATTAGCAACAAGAGAAGGTGCAGCAGTAACACCACCTCCTGGTCCTCCTCCACTTCCAAAAGCTAGTGGCTTCATTTCATCACTGAAACCCCCACCTGCTCCTAAAGGGAAAGCAAGCATAAAAAACACCAAAGAGGCTATAGTAGGTGAGAGCTCAAGAGAGAAAGTAGTTGGCCAAACAAGGCTGAAGCCTCTGCACTGGGATAAGGTTGTAGCAAATGTTGATCATTCAACCGTGTGGGATCAGATCAATGATGGGTCTTTTCGGTTTGATGATGAACTAATGGAAACACTCTTTGGATACTCAACCAGCTACAAAACCCACGAAAGAAACAGAAGTCTTTCCACTCTGGCCAAGTCCAATTCCAATACACCAGCTCAAATATTCATTCTTGAGCCAAGAAAATCTCAAAACACTGCAATTGTGTTAAGATCACTTGCCATTTCTCGCAAGGGAATATTGGATGCACTACTTGATGGCCAGGGACTAAGTGTTGAGACACTTGAAAGACTCACTAAAATAGCTCCCACCAAAGAAGAAGAAGCCAAAATCATCCAATTCAGTGGCAACCCAGATAAGCTTGCTGATGCTGAGTCTTTCCTATACTACATCCTCAAAGAAGTTCCAACAGCATTCAACCGCTTGAAAGCAATGCTTTTCAGATCAAGTTATGATTGTGAAGTTCTTCAGCTTAAGGAACACCTTCAAACACTTGAAATGGGTTGTAAGGAGCTGAGAACTAGTGGTCTATTTTTGAAACTCCTTGAGGCCATTCTCAAAGCTGGGAACCGGATGAATGCTGGAACTTCAAGAGGCAATGCACAAGGTTTCAATCTAAGTGCTCTTGGAAAGCTTTCTGATGTAAAAAGCACAGATGGGAAGACCAGTTTGCTTCACTTTATAGTGGAACAAGTGGTTCAGTCTGAAGGAAAGCGACAAGCTATTTATCAAAAGCACAACCTTCGCATAAGCAATGGTGAAACAAGCAATGAGAATAGACCTTATTTTTATTCACATAGCATGATATCACAAGAAGCAGAGAAAGAATATGTAATGTATGGTTTGAAAGTGTTGGGTGGGTTAAGTGATGAGTTATCTGAAGCAAAGAAAGCAGCTAGTATTGAGTATCACAATTTGATCACTATGTGTTCCACTCTCAATGCTCATGTTAATGAAATTCGACAGATTATAACATGTTGTGGCAACACTAAGAGAGGTGGATTTATCAATGAAATGAAAGGGTTTCTAGAGGAATGTGAAGATGAGCTTAAGGTGGTCAAAGAGGAGCAGACAAGGATCATGGAGCTTGTGAAGAAAACGAACGAGTACTATCTAGCTGGAGCGTCCAAAGACAATTTGTCAAATCCCTTTCAACTGTTTGTTATTGTAAAAAATTTTGTTCACATGGTAGATCATGCTTGCATAGAATTGAAAAGGAAGCTAGAGAAGAAGAATATAGGAGTAGAGGCTGTATCAACACCACCTTTGTCACCGTCAAAGAGGACACCACTCAGATTCCCTAACTTTGATTTGTATTTTCTGTCAAATATGTCAGTAGCTTCTTCTTCCAGTCAATCAGAAGCTGATTTCTGA 2061 0.3993 MSAPSHAIAKAVVATAGVMLLIAMVFVYFFHKFVLARYHQRHKVAAILRESGVNHEYIKKVGGNVKGLIVEENGVDILYMMETESRQLITVFPNSIINPSFEEDEEEKRIDIMVQRSRPSKPQIPLVRESPSWIGHENLVKPLSQISTLPSSVSSSLATREGAAVTPPPGPPPLPKASGFISSLKPPPAPKGKASIKNTKEAIVGESSREKVVGQTRLKPLHWDKVVANVDHSTVWDQINDGSFRFDDELMETLFGYSTSYKTHERNRSLSTLAKSNSNTPAQIFILEPRKSQNTAIVLRSLAISRKGILDALLDGQGLSVETLERLTKIAPTKEEEAKIIQFSGNPDKLADAESFLYYILKEVPTAFNRLKAMLFRSSYDCEVLQLKEHLQTLEMGCKELRTSGLFLKLLEAILKAGNRMNAGTSRGNAQGFNLSALGKLSDVKSTDGKTSLLHFIVEQVVQSEGKRQAIYQKHNLRISNGETSNENRPYFYSHSMISQEAEKEYVMYGLKVLGGLSDELSEAKKAASIEYHNLITMCSTLNAHVNEIRQIITCCGNTKRGGFINEMKGFLEECEDELKVVKEEQTRIMELVKKTNEYYLAGASKDNLSNPFQLFVIVKNFVHMVDHACIELKRKLEKKNIGVEAVSTPPLSPSKRTPLRFPNFDLYFLSNMSVASSSSQSEADF* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0864 686 SUPERFAMILY Formin homology 2 domain (FH2 domain) 221 640 - -
Apr1g0864 686 Pfam Formin Homology 2 Domain 214 626 IPR015425 -
Apr1g0864 686 ProSiteProfiles Formin homology-2 (FH2) domain profile. 208 652 IPR015425 -
Apr1g0864 686 Coils Coil 565 592 - -
Apr1g0864 686 SMART it6_source 208 641 IPR015425 -
Apr1g0864 686 PANTHER FORMIN-LIKE PROTEIN 2 681 - -
Apr1g0864 686 PANTHER FORMIN-RELATED 2 681 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Apr1g0864 686 MobiDBLite consensus disorder prediction 158 181 - -
Apr1g0864 686 Gene3D Formin, FH2 domain 230 645 IPR042201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0864 Apr-Chr1 11514026 11516434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0864 8 686 FH2 protein (formin) Gene Family AT1G70140 41.806 1.76e-164 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0864 - - gsj:114409782 1083.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0864 1 11514026 11516434 Apr9g3059 9 37401465 37403747 ECH
Apr1g0864 1 11514026 11516434 Apr1g0864 1 11514026 11516434 ECH