Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0863 ATGGCTGCCGCCGGCGATGTTTTCAGGCACAGTTTGCCGGAAGTGGGTGCCGGAAAGCTGCACGTGCTTGCAGTTGATGATAGCCACGTGGACCGCAAGGTTATTGAACGCTTGCTAAAAATCTCATCTTGCAAAGTGACGGTGGTAGAGAGTGGAACCAGAGCTCTACAGTATCTGGGATTGGATGGGGACAAGAGCGCCCTTGGTTTTGATGGTGTGAAGGTTAATTTGATAATGACAGATTATTCCATGCCGGGGATGACAGGATACGAACTACTCAAGAAGATAAAGCAGGAGTCATCTGTTTTTAGAGAGATTCCCGTGGTGGTTATGTCGTCTGAGAATATCTTGACCCGAATTGATAGTTGCTTGGAGGAGGGAGCAGAGGAGTTTCTGTTGAAGCCTGTCAAGTTATCAGATGTTAAACGCTTAACAGATTTTATCATGAGAGGTGAAGGGAAGAATGGAGTACAAAAATCTCAAAAAAGAAGCCGATCCGACGATTGCGTTCTGTCTAGGTCAACTGCATTCTCATCAGTTTCTCATCCTTGTGATCTATCCTCACCAACTGTTTTGTACTCCAAGAAATCAAGATTGAGCATAGATTGA 609 0.4516 MAAAGDVFRHSLPEVGAGKLHVLAVDDSHVDRKVIERLLKISSCKVTVVESGTRALQYLGLDGDKSALGFDGVKVNLIMTDYSMPGMTGYELLKKIKQESSVFREIPVVVMSSENILTRIDSCLEEGAEEFLLKPVKLSDVKRLTDFIMRGEGKNGVQKSQKRSRSDDCVLSRSTAFSSVSHPCDLSSPTVLYSKKSRLSID* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0863 202 Pfam Response regulator receiver domain 22 142 IPR001789 GO:0000160
Apr1g0863 202 Gene3D - 19 187 - -
Apr1g0863 202 ProSiteProfiles Response regulatory domain profile. 21 149 IPR001789 GO:0000160
Apr1g0863 202 SMART REC_2 20 145 IPR001789 GO:0000160
Apr1g0863 202 CDD REC_typeA_ARR 22 144 - -
Apr1g0863 202 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-LIKE PROTEIN 15 199 - -
Apr1g0863 202 PANTHER TWO-COMPONENT RESPONSE REGULATOR 15 199 IPR045279 GO:0009736
Apr1g0863 202 SUPERFAMILY CheY-like 19 149 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0863 Apr-Chr1 11508439 11511089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0863 6 163 Response Regulator Gene Family AT5G62920 70.886 7.95e-75 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Apr1g0863 Response_reg 1.2e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0863 K14492 - gmx:100819165 333.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0863 1 11508439 11511089 Apr9g3060 9 37405090 37407372 ECH
Apr1g0863 1 11508439 11511089 Apr1g0863 1 11508439 11511089 ECH