Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0841 ATGAATAAATTGGCACCAGGGAATGTACCAAGAGACCCTAAGTGGGGTTGGAACCTTACATCAGATCCCTGCATTGATAAGTGGTATGGTGTGAGTTGCAATTCAGACAACAAACACGTGAAGGGTATAATTCTTGAGAATTTCAATTTTGGTGGTGTTGTGGACCCCAGTTCTCTTTGCATACCAAAATCTCTTCAAATCTTGAGCCTTAGGAATAACATTTTACATGATATGATATCAGAGGATATAGGAAACTGCAAGTTCTTGACTCACTTGTACCTAAGTGGGAATCAATTCTCTGGTGACCTTCCTATTTCTGTTGGAAAACTAGGTAACTTGAAGCGGCTTCACATTTCTGACAACCACTTCACTGGTGAGCTTCCTAACATGGTTAATGTTTCAGGTTTGATATCCTTTTTAGCTGACAACAACAACTTCACTGGGGAGATTCCTGATTTTGACTTCTCCAATCTTGAATCGTTTAATGTCTCCAACAACAATTTACAAGGTCCAGTCCCTGACGTCAAAGGCAAATTCTATGCAGAAAGTTTTTTGGGTAATCCTAATTTATGTGGAACGCCACTCTCAAACACATGTCCACCATCTGAAAAGAAGGACAAAAAAACATTCCCTAATGATTTGTCCATTTATCTAGGTTACTTAGTTCTTGGTTTAATTCTCCTGCTTTTTTTGGCCTTCAAATTGTTAAGTAAATTCAAGACCAAAGATAAAACATTGGATGTGGAAAAGAAGGAAGTGACACATGATACTAGCGGTGACAAGCCTAATGAAATTTCTAGTTCCAATGGATCAAAGAATTGTATTGGGATTAGATCTGAGTATTCTCTGACATCTTTGGAAAGTAGGGTCACAACATCAGGCCTTGTTCTTCTTTCAAGTAGAACGCTCAGAGGCTTGCAATTTGAGGACTTGCTTAGTGCTCCTGCTGAGTTGGTTAGGAGAGGGAAGCATGGAAGCCTCTACAAGGTTATGCTCGAAAATGGGGTGTTATTGGCAGTGAAGAGGATCAAGGATTGGGGAATTTCAAAGCAAGATTTTGAGAGAAGGATGAACATCATAGCCCAAGTGAAGCATCCACGCGTGTTGCCACCTGTTGCATATTATTGCTCTCAACAAGAGAAGCTCCTAGCGTATGAATATCTGCAAAATGGCAGTCTCTTCACCTTACTCTACGGATCCCAAAGTGACCACTCGTTTAACTGGGGGAATAGACTAAACGTTGCTGCTAAGATAGCCGAGGCATTGGCATATATGCATCATGAGCTTCTTGAGAATGGGATAGCACATGGTAACTTAAAATCAAGTAACATTTTGTTTGACAGGAACATGGATCCATGCATAAGCGAATATGGCCTAATGATGGTTGAAAATGAAGATCAATTAGTCCTTTCCCACAACAAAAGCATCAAAAGCAAAAATTTGATTGCAGCCACCTTCGAAGCTGATATATATGCCTTTGGTATGATACTTCTCGAGTTGCTAACTGGGAAAGTAATTAAAAACGATGGATTTGATCTGGTTAAATGGGTAAAGTCAGTGGTTGCAGAGGAATGGACTGTGGAAGTTTTTGACAAGTCCTTTATCTCTCAAGGTGCTTCTGAGGAGAGGATGATGAATTTGTTGCAGGTAGCCTTAAAATGTGTAAATCCTTCTCCAAATAATAGGCCTAGTATGAGTCAAGTTGCAGTGATGACAAATGCATTGAAAGAGCAGGAAGAAAAATCCACATCCTTTGACACATGA 1764 0.3991 MNKLAPGNVPRDPKWGWNLTSDPCIDKWYGVSCNSDNKHVKGIILENFNFGGVVDPSSLCIPKSLQILSLRNNILHDMISEDIGNCKFLTHLYLSGNQFSGDLPISVGKLGNLKRLHISDNHFTGELPNMVNVSGLISFLADNNNFTGEIPDFDFSNLESFNVSNNNLQGPVPDVKGKFYAESFLGNPNLCGTPLSNTCPPSEKKDKKTFPNDLSIYLGYLVLGLILLLFLAFKLLSKFKTKDKTLDVEKKEVTHDTSGDKPNEISSSNGSKNCIGIRSEYSLTSLESRVTTSGLVLLSSRTLRGLQFEDLLSAPAELVRRGKHGSLYKVMLENGVLLAVKRIKDWGISKQDFERRMNIIAQVKHPRVLPPVAYYCSQQEKLLAYEYLQNGSLFTLLYGSQSDHSFNWGNRLNVAAKIAEALAYMHHELLENGIAHGNLKSSNILFDRNMDPCISEYGLMMVENEDQLVLSHNKSIKSKNLIAATFEADIYAFGMILLELLTGKVIKNDGFDLVKWVKSVVAEEWTVEVFDKSFISQGASEERMMNLLQVALKCVNPSPNNRPSMSQVAVMTNALKEQEEKSTSFDT* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0841 587 Gene3D Phosphorylase Kinase; domain 1 287 387 - -
Apr1g0841 587 PANTHER LRR RECEPTOR-LIKE KINASE 1 586 - -
Apr1g0841 587 Pfam Leucine Rich Repeat 112 129 IPR001611 GO:0005515
Apr1g0841 587 SUPERFAMILY L domain-like 19 194 - -
Apr1g0841 587 ProSiteProfiles Protein kinase domain profile. 313 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g0841 587 Pfam Protein kinase domain 321 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g0841 587 Gene3D Transferase(Phosphotransferase) domain 1 388 586 - -
Apr1g0841 587 Gene3D Ribonuclease Inhibitor 8 153 IPR032675 -
Apr1g0841 587 PANTHER OS05G0588300 PROTEIN 1 586 - -
Apr1g0841 587 MobiDBLite consensus disorder prediction 249 271 - -
Apr1g0841 587 Gene3D Ribonuclease Inhibitor 154 203 IPR032675 -
Apr1g0841 587 SUPERFAMILY Protein kinase-like (PK-like) 317 571 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0841 Apr-Chr1 11028363 11030815 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0841 10 569 Receptor kinase-like Gene Family AT5G24100 32.526 1.94e-92 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Apr1g0841 Pkinase 1.1e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0841 - - gmx:100787974 932.939