Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0835 ATGGTAGCAAGATCATGCACGAATTTGTTGGACTTGGTGTCAGGGGATATTTTGAATTTCCCTCAAACTCCTAGAGCTCTTCCGCGAGTTATGACTGTTCCAGGAATTATGTCTGATGTTGAGGGTAAACAAAGTAATGATGATGATTCAAGTGCTTTTGCATCAGAACACCGTCACAAGATAATCATAGTAGCAAGTTCTCTTCCTCTCAATGCTAAAATGGATAACGTATCTGGCAGATGGTGTTTTAGTTATGATGAAGATTCAATTTTTTGGCAGTTAAAGGATGGTCTCTCTCCTGATACTGATGTTGTTTATGTGGGATCCCTTAAGGTTGACATTGATGCAAGTGAGCAAGAGAAAGTTTCTGCTCATTTACTAGAGGAATTCAATTGTGTGCCTACTTTTATTCCTTCAGACCTCCACAAACAATTCTATGATGGATTCTGCAAGCAACATTTATGGCCTCTATTTCATTACATGTTGCCCATGTATCCAGGCAATGGCTATCGCTTTGATAGGTCACTGTGGCAGGCTTATGTTTCTGCTAACAAGATATTTGCAGATAAAGTCATGGAAGTCATTAATCCAGAAGATGATTATGTATGGGTTCATGATTACCATCTCATGGTTCTTCCAACATTTCTGCGGAGGCGGTATAGTCGGGTCAGGCTTGGTTTTTTCCTCCATAGTCCATTTCCTTCATCAGAAATTTATAGAACCCTACCTGTCAGAGGTGAAATTTTGAAAGCACTGCTTAATGCAGATTTAGTTGGTTTTCACACATTTGATTATGCTCGCCATTTTCTGTCATGCTGCAGTCGAATGCTTGGCTTGGAATATGAATCCAAAAGGGGTTACATTGGACTTGAATACTTTGGCCGTACAATATTCATTAAAATATTACCTGCTGGGATTCATATGGGTCGACTTCAATCTGCCTTAAACCATCCTTCCTCTTCCATCAAAGTCAGAGAAATCCGTGAACAATTAAAGGGGAAAAAACTTATTGTTGGTGTTGATGATATGGACATATTTAAAGGTGTAAGTTTAAAGTTCTTGGCCATAGAACAACTCTTGCAACAATATCCAGAACTGCAGGGTGAGTTAGTACTGATCCAAATTTTGAATCCCCCAAATAGTATGGACGGAGATGTTGGGGAAGCAGAGAACGAGGCTTACATTTCTGCCAAAAGGATAAATGACAGGTTTGGTTTGCCAGGTTATGAACCTATTATCATTATTGATCATCATATTTCTTTCTATGAGAAGACAGCCTATTATGCTTTGGCCGAGTGTTGCATTGTGAATGCAGTGCGCGATGGTTTGAATTTGGTTCCATACAAGTACATTGTTTGCAGGCAGGGTAGTTCTATAATGGATGAAGCCTTAGAATTTGCTTCTGGATCCCCACGTACAAGTGCACTTGTTGTTTCTGAGTTTATAGGTTGCTCACCATCTCTTAGTGGGGCAATCAGGGTAAATCCATGGGATATTAGTGCTGTAGCTGAAGCACTAAATTTGGCTATCACAATGCCTCATGGAGAAAAACAGTTTCGGCATGAGAAGCACTATAAATATGTTAGTTCTCATGATGTGGCTTACTGGGCACGAAGTTTTGAACAAGACCTAGTCTTCTCGTGCAAGGATCATGACAGGAAACGTTGCTGGGGCATTGGCTTTGGCTTGAATTTCAGAATTTTGTCCCTCTCTCCCAGTTTTAGGAAGCTATCCATAGACCATATTGTCTCTGCATATAACAGGACAAATTGCAGGGCAATCTTTTTGGATTATGATGGTACAATTGTTCCTCAAGCTTCCATTGTTCAAGCCCCCAGTCTTGAAGTTGTATCGGTGCTAAATAATCTTTGCAGTGATCCTAACAACACTGTGTTTATTGTTAGTGGCAGGGGAAAAACCTCATTGGGTGAATGGTTTGATCAGTGTGAGAATCTTGGTATAGCAGCTGAGCATGGTTATTTTATAAGGTGGGGTAAACAATCAAGTTGGGAAATGAGACATATAGGCACAGATTTTGCGTGGAAAACGATTGCTGAACCTGTGATGAGATCGTATACCGAGGCCACAGATGGCTCCTACATAGAGACCAAAGAGAGTGCCTTGGTATGGCATTACTATAACGCTGATCCTGACTTTGGATCCTGGCAAGCCATGGAGCTATTGGATCACCTTGAAAGTGTACTTGCAAATGAACCTGTAGTTGTTAAGAAGGGACAGCATATTGTTGAAGTCAAGCTTCAGGGGATTACTAAAGGGCTGGTTGCGCAAGAAGTGCTGTCAACACTAACCAAGAAGGGCAAATCACCAGACTTTGTACTCTGCATTGGGGATGATAGATCTGATGAGGATATGTTTGAGAGCATATTAACCAAACCTGATAGTGCAACCTCCCTCTCAGCACCAGAAATCTTTGCATGCACTGTAGGACAAAAGCCAAGCAAAGCTAGATACTACCTGGATGACACTATGGACGTGATGACATTACTTCGGGATCTTGGTACTGCCTCAGGGCCTGAATCAAGATGTTCTACAGACACCCCTTTTGAGAAAAAAGAAGGTTGTTTTGAGAATATTGTTTAA 2601 0.4102 MVARSCTNLLDLVSGDILNFPQTPRALPRVMTVPGIMSDVEGKQSNDDDSSAFASEHRHKIIIVASSLPLNAKMDNVSGRWCFSYDEDSIFWQLKDGLSPDTDVVYVGSLKVDIDASEQEKVSAHLLEEFNCVPTFIPSDLHKQFYDGFCKQHLWPLFHYMLPMYPGNGYRFDRSLWQAYVSANKIFADKVMEVINPEDDYVWVHDYHLMVLPTFLRRRYSRVRLGFFLHSPFPSSEIYRTLPVRGEILKALLNADLVGFHTFDYARHFLSCCSRMLGLEYESKRGYIGLEYFGRTIFIKILPAGIHMGRLQSALNHPSSSIKVREIREQLKGKKLIVGVDDMDIFKGVSLKFLAIEQLLQQYPELQGELVLIQILNPPNSMDGDVGEAENEAYISAKRINDRFGLPGYEPIIIIDHHISFYEKTAYYALAECCIVNAVRDGLNLVPYKYIVCRQGSSIMDEALEFASGSPRTSALVVSEFIGCSPSLSGAIRVNPWDISAVAEALNLAITMPHGEKQFRHEKHYKYVSSHDVAYWARSFEQDLVFSCKDHDRKRCWGIGFGLNFRILSLSPSFRKLSIDHIVSAYNRTNCRAIFLDYDGTIVPQASIVQAPSLEVVSVLNNLCSDPNNTVFIVSGRGKTSLGEWFDQCENLGIAAEHGYFIRWGKQSSWEMRHIGTDFAWKTIAEPVMRSYTEATDGSYIETKESALVWHYYNADPDFGSWQAMELLDHLESVLANEPVVVKKGQHIVEVKLQGITKGLVAQEVLSTLTKKGKSPDFVLCIGDDRSDEDMFESILTKPDSATSLSAPEIFACTVGQKPSKARYYLDDTMDVMTLLRDLGTASGPESRCSTDTPFEKKEGCFENIV* 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0835 866 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 851 IPR001830 GO:0003824|GO:0005992
Apr1g0835 866 SUPERFAMILY HAD-like 592 840 IPR036412 -
Apr1g0835 866 CDD HAD_TPP 593 833 - -
Apr1g0835 866 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 544 - -
Apr1g0835 866 Gene3D Glycogen Phosphorylase B; 313 529 - -
Apr1g0835 866 Gene3D - 594 826 IPR023214 -
Apr1g0835 866 Gene3D Glycogen Phosphorylase B; 51 312 - -
Apr1g0835 866 TIGRFAM T6PP: trehalose-phosphatase 592 839 IPR003337 GO:0003824|GO:0005992
Apr1g0835 866 Pfam Glycosyltransferase family 20 60 544 IPR001830 GO:0003824|GO:0005992
Apr1g0835 866 CDD GT20_TPS 60 544 IPR001830 GO:0003824|GO:0005992
Apr1g0835 866 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 593 794 IPR006379 -
Apr1g0835 866 Pfam Trehalose-phosphatase 595 829 IPR003337 GO:0003824|GO:0005992
Apr1g0835 866 Gene3D - 674 754 - -
Apr1g0835 866 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING)-RELATED 1 851 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0835 Apr-Chr1 10936573 10943353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0835 1 843 Trehalose Biosynthesis Gene Families AT1G23870 67.497 0.0 1228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0835 K16055 - gmx:100812031 1519.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0835 1 10936573 10943353 Apr1g0835 1 10936573 10943353 ECH