Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0827 ATGAAGGAAAGTAGTGATGCGTTTGTGCGAGCAGATCAGATTGATCTAAAAAGCATAGATGAACAGCTAGAGAGGCATCTAAGTAAGGCATTGAAGAAGCACAAAGAGGAAGACGATGATGCTTCTTCTGCTGCTTCTGATGTTCCTCGTCACTCTAGCTCCTTTGCCACTGCTACTAAATTCAAAAGTGTTGCTGCAACTGCCTTCAAGAAGCAAAGGGAAGAGTGGGAAATTGACCCTTCTAACCTCATCATCAAGAGTGTCATAGCTCGTGGCACTTTCGGCACTGTCCACCGTGGCATCTATGATGGACAAGATGTTGCCGTTAAAATGCTGGATTGGGGTGAAGAAGGGCACCGGACAGAAGCTGAAATAGCTGCCCTCAGATCGGCGTTTACTCAAGAAGTTGCTGTTTGGCATAAACTTGATCATCCTAATGTCACTAAGTTTATAGGGGCAACAATGGGGTCTTCAGAATTACAGATACAAACTGATAATGGTCTAATTAGCATGCCAAGCAATATCTGCTGTGTAGTTGTAGAGTATCTTGCCGGAGGTACACTGAAATCTTTCCTAATAAAGAATAGGAGGAGGAAGTTAGCTTTCAAGGTTGTCATCCAGCTGACGCTTGATCTTGCAAGAGGGCTGAGTTATCTTCACTCTCAGAAGGTTGTACATAGAGATGTAAAGACAGAGAACATGCTGTTGGACAAGACACGCACCGTTAAAATTGCTGATTTTGGGGTTGCTCGTGTTGAAGCCTCAAATCCTAATGACATGACTGGGGAGACTGGTACACTTGGTTACATGGCTCCTGAGGTTTTAAACGGCAACCCGTATAACAGGAAATGTGATGTGTACAGTTTTGGCATCTGTTTATGGGAAATATATTGTTGTGACATGCCATATCCTGACTTAAGTTTCTCAGAGATTACTTCAGCTGTTGTTCGCCAGAATCTGAGACCAGAAATACCAAGATGTTGCCCAAGTTCTCTAGCAAATGTAATGAAGAAATGCTGGGATGCCAATCCTGATAAACGTCCCGAAATGGACGAGGTAGTTTCGATGCTAGAGGCTATTGACACTTCCAAAGGTGGAGGTATGATCCCTGTTGATCAGCAGCAGGGTTGTCTTTGCTTCCGTAAGTACAGGGGGCCTTGA 1161 0.441 MKESSDAFVRADQIDLKSIDEQLERHLSKALKKHKEEDDDASSAASDVPRHSSSFATATKFKSVAATAFKKQREEWEIDPSNLIIKSVIARGTFGTVHRGIYDGQDVAVKMLDWGEEGHRTEAEIAALRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELQIQTDNGLISMPSNICCVVVEYLAGGTLKSFLIKNRRRKLAFKVVIQLTLDLARGLSYLHSQKVVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEITSAVVRQNLRPEIPRCCPSSLANVMKKCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIPVDQQQGCLCFRKYRGP* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0827 386 MobiDBLite consensus disorder prediction 27 45 - -
Apr1g0827 386 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 380 - -
Apr1g0827 386 Pfam Protein tyrosine and serine/threonine kinase 85 357 IPR001245 GO:0004672|GO:0006468
Apr1g0827 386 MobiDBLite consensus disorder prediction 27 51 - -
Apr1g0827 386 ProSiteProfiles Protein kinase domain profile. 83 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g0827 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Apr1g0827 386 SMART serkin_6 83 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g0827 386 Gene3D Phosphorylase Kinase; domain 1 71 166 - -
Apr1g0827 386 PANTHER DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED 1 380 - -
Apr1g0827 386 CDD STKc_MAP3K-like 89 357 - -
Apr1g0827 386 SUPERFAMILY Protein kinase-like (PK-like) 59 357 IPR011009 -
Apr1g0827 386 Gene3D Transferase(Phosphotransferase) domain 1 184 375 - -
Apr1g0827 386 PRINTS Tyrosine kinase catalytic domain signature 180 193 IPR001245 GO:0004672|GO:0006468
Apr1g0827 386 PRINTS Tyrosine kinase catalytic domain signature 218 236 IPR001245 GO:0004672|GO:0006468
Apr1g0827 386 PRINTS Tyrosine kinase catalytic domain signature 284 306 IPR001245 GO:0004672|GO:0006468
Apr1g0827 386 PRINTS Tyrosine kinase catalytic domain signature 328 350 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0827 Apr-Chr1 10682177 10686832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0827 6 386 MAP Kinase Kinase Kinase AT3G22750 63.896 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Apr1g0827 PK_Tyr_Ser-Thr 6e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0827 - - gmx:100809898 723.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0827 1 10682177 10686832 Apr9g3089 9 37680727 37685483 ECH
Apr1g0827 1 10682177 10686832 Apr1g0827 1 10682177 10686832 ECH