Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0826 ATGAAGAAGAAATTAGCAAGCACCATCACTGAGTCCTCTAAACTTGATCGCAAAACCATTGAAAAGAACCGCAGAATTCACATGAAAACCCTCTGCATCCAGCTTGCTTCTCTTATTCCTTCCAACCTCAAACCATCCAAATCCAAGTTTATGCACGGACAGCAAGATCAAGTGGATCTGGCAGCGAGGTATATAAAGCACATGAGAGAAAGAGTAGAGAAATTGAAGAGGCAGAAAGAGCAAGCCATGAAGTCAAACTCAAACCAAACAAATAGCAGAAAAGCGTTGAATAATGTCGATTCTAAATTGCCAGTACTTGAGCTAAGAGACTTGGGTTCAGGCATAGAAGTGGTATTGGTAAGTAAGTTGAACAACAAAACCTTCATGTTGTACGAAGTAATTAGTGTCCTTGAGGAAGAAGGCGCTGAGGTTGTCGCTGCAAGCTACTCAACTGTGGGGGAAAAGATATTTTACGTTGTTCATGCTCAGGTTAAAATATCCAGAGTGGGGGTAGAGACCTCAAGGGTATATCAGAGGCTCCAGGAGTTTATTGCTCCACTAGAAAGCTGGGAACACGATTAA 582 0.421 MKKKLASTITESSKLDRKTIEKNRRIHMKTLCIQLASLIPSNLKPSKSKFMHGQQDQVDLAARYIKHMRERVEKLKRQKEQAMKSNSNQTNSRKALNNVDSKLPVLELRDLGSGIEVVLVSKLNNKTFMLYEVISVLEEEGAEVVAASYSTVGEKIFYVVHAQVKISRVGVETSRVYQRLQEFIAPLESWEHD* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0826 193 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 11 185 IPR015660 GO:0003700|GO:0006357
Apr1g0826 193 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 16 85 IPR036638 GO:0046983
Apr1g0826 193 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 12 68 IPR011598 GO:0046983
Apr1g0826 193 Gene3D - 12 100 IPR036638 GO:0046983
Apr1g0826 193 SMART finulus 18 74 IPR011598 GO:0046983
Apr1g0826 193 Coils Coil 58 92 - -
Apr1g0826 193 PANTHER TRANSCRIPTION FACTOR BHLH162 11 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0826 Apr-Chr1 10627323 10628193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0826 7 184 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 37.113 3.10e-24 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Apr1g0826 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0826 - - gmx:100790403 276.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0826 1 10627323 10628193 Apr9g3090 9 37708093 37709827 ECH
Apr1g0826 1 10627323 10628193 Apr1g0826 1 10627323 10628193 ECH
Apr9g3090 9 37708093 37709827 Apr1g0826 1 10627323 10628193 PCT