Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0803 ATGCAAAGCGCAGCTTTCACTCTCTCCCCTTCTCTCCCTCTCCGCAACATCAACCACAACAAACAGTGGAGACCTTCTCTCACCGTTCGTTTCTCTGCCAAACCCAACAACAACGAAGGCGTAAACTCCAATGGCGTTTCTTACTCATGCTCTTCCTTCACACGCCGATCTTGGTGCCTCGCTCCTTCGTCTTCCTTCAAGTTCAGACCCCTTCCTTCTCCCCCTGTTCGCGCCGCCGATAGCGTTGTTCCCGAAAGCGCTCCCTCTGAAAACGCCTTTTTCAAAACTCTCGAACTCGGAGCCTTGTTTGGCCTTTGGTACCTCTTTAACATCTACTTCAATATCTACAACAAACAGGTGTTGAAGGCTTATCATTTTCCGGTGACTGTTACGGCTGTTCAATTTGCTGTTGGGACTGTGCTTGTGACGTTAATGTGGGGTTTGAATCTCTATAAGAGACCGAAAATAAGTGGTGCTCAGCTTGCGGCTATTTTGCCATTGGCTTTGGTCCATACTTTGGGGAACCTTTTCACCAATATGAGTCTTGGAAAGGTGGCTGTGTCGTTCACTCACACGATCAAAGCTATGGAGCCTTTCTTTTCGGTGGTCCTTTCTGCCATGTTTCTTGGAGAGATGCCTACACCATGGGTGGTTGGTTCCCTTCTGCCTATTGTTGGTGGTGTTGCACTGGCATCTGCTACTGAGGCCTCTTTCAATTGTGCAATGGCGTCAAATGTGTCAAATCAGTCTCGTAATGTTCTTAGCAAAAAGGTCATGGTTAAGAAAGAGGATTCTATGGACAACATTACTCTCTTCTCTATAATAACAGTAATGTCATTCTTCTTGTTAACACCTGTGGCTGTCTTCATGGAGGGTGTCAAATTTACCCCTGCTTATCTGCAATCTGCTGTGAGTATCTTGATGGGGTTAAATGTTAGACAATTGTACATCAGATCTCTTCTTGCTGCTCTCTGTTTCCATGCATATCAGCAAGTTTCTTACATGATATTGCAAAGGGTATCACCCGTTACGCACTCTGTGGGCAATTGTGTGAAGCGAGTTGTGGTCATCGTGAGCTCTGTCATCTTCTTCCAAACGCCTGTCTCTCCTGTGAATGCTTTAGGAACTGCTATTGCACTTGCTGGTGTTTTCCTCTATTCAAGGGTGAAGCGAATCAAGCCAAAGCCAAAAACAGTTTAG 1200 0.4592 MQSAAFTLSPSLPLRNINHNKQWRPSLTVRFSAKPNNNEGVNSNGVSYSCSSFTRRSWCLAPSSSFKFRPLPSPPVRAADSVVPESAPSENAFFKTLELGALFGLWYLFNIYFNIYNKQVLKAYHFPVTVTAVQFAVGTVLVTLMWGLNLYKRPKISGAQLAAILPLALVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVVLSAMFLGEMPTPWVVGSLLPIVGGVALASATEASFNCAMASNVSNQSRNVLSKKVMVKKEDSMDNITLFSIITVMSFFLLTPVAVFMEGVKFTPAYLQSAVSILMGLNVRQLYIRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPVNALGTAIALAGVFLYSRVKRIKPKPKTV* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0803 399 PANTHER SOLUTE CARRIER FAMILY 35 96 373 - -
Apr1g0803 399 SUPERFAMILY Multidrug resistance efflux transporter EmrE 312 391 - -
Apr1g0803 399 PANTHER TRIOSE PHOSPHATE/PHOSPHOENOLPYRUVATE TRANSLOCATOR-RELATED 96 373 - -
Apr1g0803 399 SUPERFAMILY Multidrug resistance efflux transporter EmrE 145 232 - -
Apr1g0803 399 Pfam Triose-phosphate Transporter family 98 387 IPR004853 -
Apr1g0803 399 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 97 397 IPR004696 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0803 Apr-Chr1 10047672 10051386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0803 1 398 Antiporters AT5G33320 68.585 1.86e-180 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0803 K15283 - gmx:100804563 631.713