Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0801 ATGGAAGAAACATTTGTTCCCCTCCGTGGGATTAAGAATGACCTCAAAGCAAGAATTATGTGCTACAAACAAGATTGGACCAGTGGAATCCGAGCAGGATCCAGGATCCTTGCCCCAACTACATACATATTTTTTGCTTCTGCAATTCCTGTTATTTCTTTTGGGGAGCAACTGGAGAGAAATACTGATGGAACTCTCACTGCTGTGCAGACTCTTGCATCAACTGCACTCTGTGGTATTATCCACTCAATCATTGGAGGGCAACCTCTCCTCATACTAGGCGTAGCCGAGCCAACAGTTCTGATGTACACATTCATGTATAACTTCGCGAAGGATCGAAAGGATTTGGGACACAAATTATTTCTGCCTTGGACTGGATGGGTGTGTGTTTGGACTGCTCTGTTGCTCTTTTTGCTGGCCATTCTTGGTGCATGCTCCATAATCAATAGATTCACACGCCTTGCTGGTGAACTATTTGGTTTGCTAATTGCAATGCTTTTTATGCAGCAGGCTATAAAGGGACTTGTGGAAGAGTTTTGTGTGCCCAAGAACCAAGCAGAAGGCACCAATCAAATTGCACTCCAATCTTCTTGGCTGTTTGGCAATGGAATGTTTGCCTTAGTTTTGTCATTTGGTCTTCTTTTTACTGGTCTACGAAGTCGTAAGGCTAGATCCTGGCGTTACGGAACAGGTTGGCTAAGGGGATTTATAGCTGATTATGGAGTCCCACTAATGATTCTCGTATGGACTGCTGTGTCTTACATACCTGTCAATAAGGTTCCAAGGGGAATCCCTAGGCGACTTTTCAGTCCAAACCCATGGTCTCCTGGTGCATACTCAAATTGGACTGTTGTCAAGGAAATGCTGAAAGTGCCCCCCTTATATATTGTTGGAGCATTTATACCAGCAACTATGATTGCTGTGCTTTACTACTTTGATCATAGTGTTGCATCACAACTTGCTCAGCAGAAGGAGTTCAATCTAAGAAAACCCTCATCTTATCATTATGACTTGCTGCTCTTGGGCTTTTTGACCATATTGTGTGGGCTTATTGGAATCCCTCCTTCAAATGGCGTGATTCCACAATCTCCAATGCATACAAAGAGCTTAGCTACTCTAAAACATCAGCTTTTGCGGAATAAGCTTGTATCTACTGCACGAAACAGCATGCGGAAAAACGTTAACCTGAGTCAGTTATATCAAAGTATGAAAGAAGCATATGATGAAATGCAGACTCCACTGGTTCCCCAAATGCCACCTACCTTGGGGCTGAAAGAGCTGAAGGAATCTACCATTGAACTGGCTTCAAGTCATGGATACATTGATGCTCCCATTGATGAGATTGTCTTTGATGTGAATAAGGATGTTGATGACCTTTTGCCAGTTGAAGTTAAAGAGCAGCGCTTCAGCAATCTACTGCAGGCATTGATGGTTGGGGCTTGTGTTGCTGCTATGCCACTTTTGAAGAAGATACCAACCTCAGTGCTTTGGGGTTATTTTGCCTTCATGGCAATTGAAAGCTTGCCAGGAAATCAGTTTTGGGAGAGAATATTGTATCTTTTCACCGCTCCAAGTCGAAGATACAAACTGCTGGAAGAATACCATGCCACCTTTGTTGAGACTGTTCCCTTCAAAACAGTTGCCATGTTCACCTTATTCCAGACTGGATACTTGCTTCTTTGCTTCGGCATAACCTGGATACCAATTGCTGGGGTCCTTTTCCCATTGTTAATCATGCTTCTTGTCCCTGTACGGCAATATTTTCTTCCCAAGTTTTTCAAAGGAGCCCATCTTCAAGAGTTGGACGCCGCAGCATATGAAGAAGCACCTGCCATTGCTTTCAACATGTCCTTTGAAGATCCAAATAGCCAGGCAACAATGGTGAATATCAGTGGCGGGGAAATCCTTGATGAAATTATTACAAGGAGTCGTGGAGAGATTCGCCGCACTCAAAGCCCCAAAACAAGAAGTTCAACTCCAAACTCAACAGGAGATATAAGACCAGCTAATAGCCCTCAGTTGTCGCGAAGGATTCCTAGCCCTCGAGTGACTGAGTTGAGGGGCGAAAGCAGCCTTGGACCAACTGGGAAGGAGATCAAGTTAATGCAAACACCAAGTCCACGGTCATCAGTTCTTGGAAAAGTTATCAAAGGTTCGCCCTCAAGCTAA 2169 0.4398 MEETFVPLRGIKNDLKARIMCYKQDWTSGIRAGSRILAPTTYIFFASAIPVISFGEQLERNTDGTLTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVLMYTFMYNFAKDRKDLGHKLFLPWTGWVCVWTALLLFLLAILGACSIINRFTRLAGELFGLLIAMLFMQQAIKGLVEEFCVPKNQAEGTNQIALQSSWLFGNGMFALVLSFGLLFTGLRSRKARSWRYGTGWLRGFIADYGVPLMILVWTAVSYIPVNKVPRGIPRRLFSPNPWSPGAYSNWTVVKEMLKVPPLYIVGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTILCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNKLVSTARNSMRKNVNLSQLYQSMKEAYDEMQTPLVPQMPPTLGLKELKESTIELASSHGYIDAPIDEIVFDVNKDVDDLLPVEVKEQRFSNLLQALMVGACVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILYLFTAPSRRYKLLEEYHATFVETVPFKTVAMFTLFQTGYLLLCFGITWIPIAGVLFPLLIMLLVPVRQYFLPKFFKGAHLQELDAAAYEEAPAIAFNMSFEDPNSQATMVNISGGEILDEIITRSRGEIRRTQSPKTRSSTPNSTGDIRPANSPQLSRRIPSPRVTELRGESSLGPTGKEIKLMQTPSPRSSVLGKVIKGSPSS* 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0801 722 MobiDBLite consensus disorder prediction 702 722 - -
Apr1g0801 722 PANTHER BORON TRANSPORTER 2-RELATED 1 707 - -
Apr1g0801 722 Gene3D Helical hairpin bin 18 60 - -
Apr1g0801 722 Pfam HCO3- transporter family 204 375 IPR011531 GO:0006820|GO:0016021
Apr1g0801 722 Pfam HCO3- transporter family 462 552 IPR011531 GO:0006820|GO:0016021
Apr1g0801 722 Pfam HCO3- transporter family 8 179 IPR011531 GO:0006820|GO:0016021
Apr1g0801 722 PANTHER ANION EXCHANGE PROTEIN 1 707 IPR003020 GO:0005452|GO:0006820|GO:0016020
Apr1g0801 722 MobiDBLite consensus disorder prediction 652 678 - -
Apr1g0801 722 MobiDBLite consensus disorder prediction 642 722 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0801 Apr-Chr1 10007178 10012869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0801 1 697 Antiporters AT3G62270 75.179 0.0 1058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0801 K24194 - gmx:100793554 1337.4