Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0771 ATGGAATCCAAACCGTGTCATACTATAAAGCTCCTCTGTAGCTACGGCGGCAAGATCCTTCCCCGTGCCACCGACGGCGAACTCCGCTACGTCGGCGGCCACACAAGAGTTCTCACCGTCGATCGTTCCATTTCGTTTTCAGAATTGATGGTGAAGCTTGGAGAGTTGTGTGGTTCGTCTGTGACATTGAGGTGTCAATTGCCCAAGGGAGACTTGGAGACCTTGATCTCCGTCACCAACGACGAAGATTTGGCGAACATAATCGAGGAATACGATCGTGCCTCATTGAAATTGGCTCATCCGTTGAAGATCAGAGCCGTTCTTTCGCCGCCGAAGTCTCTTAACAAAATTTCTTCTGCTACATCGTCGTCTTCGTCCAGCGCCAGTCACTCTCCGTCCAGATCGCCTCACACTTCAGCTGAATCATTGCCGTACGCCGCGGCGTATCGCCTCGTCCGTCGCAATAGAACGCCGCCGGCAACAATTGCATGTCCGATCGGCGTCCGTAACGGCTCGGCGAAAACTTGTTGCTACACAGGCCAGTTCGACGGAAGCCCTAGGTTCCTGTATTATGGACCTCACTGCAATAATTACTGTCACTGA 603 0.524 MESKPCHTIKLLCSYGGKILPRATDGELRYVGGHTRVLTVDRSISFSELMVKLGELCGSSVTLRCQLPKGDLETLISVTNDEDLANIIEEYDRASLKLAHPLKIRAVLSPPKSLNKISSATSSSSSSASHSPSRSPHTSAESLPYAAAYRLVRRNRTPPATIACPIGVRNGSAKTCCYTGQFDGSPRFLYYGPHCNNYCH* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0771 200 MobiDBLite consensus disorder prediction 118 140 - -
Apr1g0771 200 PANTHER OS05G0427100 PROTEIN-RELATED 1 200 - -
Apr1g0771 200 Gene3D - 29 108 - -
Apr1g0771 200 CDD PB1_UP2 12 108 - -
Apr1g0771 200 SMART PB1_new 23 111 IPR000270 GO:0005515
Apr1g0771 200 SUPERFAMILY CAD & PB1 domains 25 116 - -
Apr1g0771 200 Pfam PB1 domain 27 97 IPR000270 GO:0005515
Apr1g0771 200 PANTHER PB1 DOMAIN PROTEIN 1 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0771 Apr-Chr1 9286863 9288553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0771 7 93 MAP Kinase Kinase Kinase AT5G57610 51.724 5.25e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0771 - - vra:106761207 292.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0771 1 9286863 9288553 Apr1g0771 1 9286863 9288553 ECH
Apr9g3147 9 38283774 38284464 Apr1g0771 1 9286863 9288553 PCT