Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0762 ATGGAGGCAGAGCTCACGACAGATGAAAATGGCACAGATTCGGAACTCCACTTACTTCATTCTTCTACGCTTCCCGAGGACAAAGTTCTTCTCCCTGTTGAGGTATGCCTCAAACCTTCCAGCACAGCTAAAATCCAAGATGTTCGTTCTGCTGTTGAGGGAATGCTTGAAAAGAGGAGTTTGAGCTATATTGATGGACCCATTCCTGTGCCTCTTGATGAACTGTTTCTCGCTGATAACGTCCAAAGAATTTGCGTTTGTGATACTGATGAAGGGATGCACAACGATAATGTTCTTTTGTTCTGGCAAGTCAAGCCTGTTGTACATGTCTTTCAGCTTAGCGAGGAAGGACCATGTGAGGATATAAGCTCTGATGGCCAGTCCTCTAGCTTCAATGAATGGATACTTCCTGCAAAAGAATTTGATGGCATGTGGGAAAGCTTAATATATGAATCTGGTCTAAAGCAACGGTTGTTACGTTATGCAGCAAGTGCGTTGCTCTTTACTGAGAAGGGTGTTGATCCATTCCTTGTTTCGTGGAACCGCATAATTCTGTTGCATGGACCTCCTGGGACAGGAAAGACGTCTTTGTGTAAAGCATTAGCTCAGAAACTATCAATTCGATTCAATTCAAGATACCCACAGTGCCAACTTATTGAAGTGAATGCACATTCTTTGTTCAGCAAATGGTTCTCTGAAAGTGGCAAGCTGGTAGCAAAACTTTTCCAAAAGATTCAAGAAATGGTAGAGGAAGAAAGCAATTTAATATTTGTATTGATTGATGAAGTTGAAAGCCTTGCTGCTGCAAGAAAAGCTGCTTTATCTGGTTCTGAACCTTCAGATTCTATTCGGGTTGTCAATGCATTGCTAACTCAGATGGACAAGTTAAAATCATCTCCAAATGTGATAATTCTAACCACATCCAACATAACTGCTGCTATCGATATTGCTTTTGTTGATCGAGCTGATATCAAAGCATATGTTGGTCCGCCAACTCTTCAAGCTCGGTATGAAATATTAAGGTCGTGCTTGCAGGAATTGATGCGTACAGGGATCTTGACCAAGGTGCAGAGAAATTGTAAAAACGTCATGCTTCCAAATTATGCTAATGCAAAGGAGAGGTTGAACACGCCAGATTTTCAAGATGGTGCCATATTCATGCAACTGAGCAAGCAACTACTTGAAACTGCGGAGGCTTGTGAGGGAATGAGTGGAAGGTCTTTGAGAAAGCTTCCATTTTTGGCACATGCAGCGCTTGCAAATCCTTATGATTGCAACCCTATTAAGTTCTTATGTACAATGATAGAAACAGCAAAGAGGGAGCGTTCTGAGCTTCCTGACTAA 1344 0.4189 MEAELTTDENGTDSELHLLHSSTLPEDKVLLPVEVCLKPSSTAKIQDVRSAVEGMLEKRSLSYIDGPIPVPLDELFLADNVQRICVCDTDEGMHNDNVLLFWQVKPVVHVFQLSEEGPCEDISSDGQSSSFNEWILPAKEFDGMWESLIYESGLKQRLLRYAASALLFTEKGVDPFLVSWNRIILLHGPPGTGKTSLCKALAQKLSIRFNSRYPQCQLIEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEESNLIFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQELMRTGILTKVQRNCKNVMLPNYANAKERLNTPDFQDGAIFMQLSKQLLETAEACEGMSGRSLRKLPFLAHAALANPYDCNPIKFLCTMIETAKRERSELPD* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0762 447 Gene3D - 123 348 IPR027417 -
Apr1g0762 447 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 416 IPR027417 -
Apr1g0762 447 ProSitePatterns AAA-protein family signature. 302 321 IPR003960 GO:0005524|GO:0016887
Apr1g0762 447 SMART AAA_5 180 332 IPR003593 -
Apr1g0762 447 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 184 202 IPR001270 GO:0005524
Apr1g0762 447 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 298 312 IPR001270 GO:0005524
Apr1g0762 447 PANTHER PACHYTENE CHECKPOINT PROTEIN 2 24 444 IPR044539 -
Apr1g0762 447 Pfam ATPase family associated with various cellular activities (AAA) 184 329 IPR003959 GO:0005524|GO:0016887
Apr1g0762 447 CDD AAA 182 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0762 Apr-Chr1 9165812 9170813 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0762 184 357 Calmodulin-binding Proteins AT3G56690 29.545 4.15e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0762 K22399 - gmx:100795009 799.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0762 1 9165812 9170813 Apr1g0762 1 9165812 9170813 ECH