Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0760 ATGGCCGTGCACTCAAAGCAGCTTCTGCAACTGCTACTTGTGGCAATCCTTATTGCAGCAACGAAAACCCAACCCATGTCAAAGCCAAACTGCAGAGACAAGTGTGGCTCTGTCACCATTCCCTTTCCATTTGGCATGACCAAGGAATGTTCCTTGAACCCCTCATTTCTCATCATCTGCAACCAAACCTCTTCCACACACACGCACATACCTTTCTTGTATAATAATAATACTAATAATAGCGTGCCATTGTTAAGCATCTCGCTCCTGGATGGCAAACTTCGCATTTCATTGCCAGTAGTGAAAGACTGTTATAACTATAGCTCTTACGAATATATAGATCATCTTAATGGAATATCGGTCTTGGAATGCGACCTGACGCCTTTTCACCTCTCGCCCAACCGAAACAAGTTAACAGTTGTTGGCGCTGACACCGCTGGATTTGTGAAACCAGATACGAAGACGGAAAATAAATACACTGCACCAATATGCCTGTCTCTGAACTACAAACATTTATTAGTGAATGGGTCTTGTTCCGGCGTTGGTTGTTGCGAGATTTCAATACAACAAGGGCTATCAAGTTTCTACTACTATGCTTATATGAACATCATCAAGAACAGTTTTTACGCCAAAGAATTTGGCAACTATCCAATCGTATGCGGTTATGCGTTCTTGGTGGAAAACGGAAACTACAGCTTCTTCAAAAAAGACCTCTTAAAGTGGGACAAGAAGGAGTTTCCTGTGATTGTGGATTGGGCAGTGGGGAACCAAAGATGCAAAGATGCTATGAATTCATCAAGTTATGCGTGTAAGGCAGACAACAGTACATGTCACAATGCAAAGGACGGAAATGGTTACCTTTGTCGATGCTCTCCTGGCTTTCGAGGAAACCCTTATCTCTTTCATGGTTGCCTAGATGTTGACGAATGCAAGGGATCTAACGATTGCATTCATCGGGAAAAGTGCAAAAACTATCCGGGGAGTTACAATTGTTCATGCCGAAAAGGATTCGTAGGAGATGGAAAAGTAAATGGATCAGGATGCAAAAAAGATACGAACAGCAGAGACATCATACTCGTAACAACTTTGAGTGTGAGCATAGGCATCATAGCACTGCTGGGGGGAAGCTTTTATGTGTACTGGGCATTCAAGAAAAGAAAGCTCATGAAACTTAAGGAACACTTTTTTGAGCAAAATGGTGGTCTATTGTTACAACAACGAGTAGCGAGGCATAGAGGGTCAGAAATGACTAAAGTCTTCACAGTGGAGGAGCTAAAAAGGGCAACTAATAACTTCAATCCAGATAGGATACTAGGGCAAGGTGGTCAAGGAACAGTTTATAAAGGAGTGTTATTAGATAATAGAACTGTAGCGATAAAAAAATCCAAAATCAGTGATCCAAACCAGATTGAGCAGTTTATTAACGAGGTTATGTTGCTTTCCGAAATCAACCACAGGAATGTGGTAAAGCTCTTGGGTTGTTGTTTAGAGACAGAAGTTCCAATGCTTGTTTATGAATTCATTTCCAATGGTACTGTTTATGAGCATCTTCATGGTCAAAGCCAGTCCTTAAAACTTACATGGAAAACTAGATTAAGAATAGCAACAGAAACTGCTGAGGCCCTGGCATATTTGCATTCTGCTACTTCTGAACCAATCATCCACAGAGATGTGAAAACTACAAATATATTACTTGATCACAATCTCACAGCAAAGGTTTCTGATTTTGGAGCTTCAAGAATTGTTCCTCTAGATCAAACTCAATTAACCACTTTGGTGCAAGGAACGTTGGGGTATCTTGACCCTGAATACTTACACACAAGCCACTTAACTGAGAAGAGTGATGTTTATAGCTTTGGGGTTGTCCTAGCAGAACTACTCACAGGAAAAAAGGCACTCGCTTTTCACAAGCAAGAGTGTGTTACGAACCTTGCTCTGTTCTTCGTTTCTTCCATGAAAGAGGATCGATTACTTGACACTGTGGACCATCACATAATTGATGAGGCGACCGCAAATGTTGACCAACTGATGGAATTTGCCAAAATTGCAAAACAGTGTTTAAAGGTGAAACGAGAAGAAAGACCCACAATGAAAGAAGTGGCAATGGAACTTGCGGGACTGAGATTTGCGGAAATGCACCAACAGGAAAGTGCCAATTTGTGTTCAGAAGACACTGAGATTTCTCTCCAATCAGAAGCGTATGTTTTAAGTGTTGTAAATGACGCTGGTGGAAGTAGTGGTATTAGTTCTGGTGTTGATAGCTTAAACCAGATTTCGACGACTTTCCCCAGTGGAAGATGA 2301 0.4137 MAVHSKQLLQLLLVAILIAATKTQPMSKPNCRDKCGSVTIPFPFGMTKECSLNPSFLIICNQTSSTHTHIPFLYNNNTNNSVPLLSISLLDGKLRISLPVVKDCYNYSSYEYIDHLNGISVLECDLTPFHLSPNRNKLTVVGADTAGFVKPDTKTENKYTAPICLSLNYKHLLVNGSCSGVGCCEISIQQGLSSFYYYAYMNIIKNSFYAKEFGNYPIVCGYAFLVENGNYSFFKKDLLKWDKKEFPVIVDWAVGNQRCKDAMNSSSYACKADNSTCHNAKDGNGYLCRCSPGFRGNPYLFHGCLDVDECKGSNDCIHREKCKNYPGSYNCSCRKGFVGDGKVNGSGCKKDTNSRDIILVTTLSVSIGIIALLGGSFYVYWAFKKRKLMKLKEHFFEQNGGLLLQQRVARHRGSEMTKVFTVEELKRATNNFNPDRILGQGGQGTVYKGVLLDNRTVAIKKSKISDPNQIEQFINEVMLLSEINHRNVVKLLGCCLETEVPMLVYEFISNGTVYEHLHGQSQSLKLTWKTRLRIATETAEALAYLHSATSEPIIHRDVKTTNILLDHNLTAKVSDFGASRIVPLDQTQLTTLVQGTLGYLDPEYLHTSHLTEKSDVYSFGVVLAELLTGKKALAFHKQECVTNLALFFVSSMKEDRLLDTVDHHIIDEATANVDQLMEFAKIAKQCLKVKREERPTMKEVAMELAGLRFAEMHQQESANLCSEDTEISLQSEAYVLSVVNDAGGSSGISSGVDSLNQISTTFPSGR* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0760 766 Pfam Calcium-binding EGF domain 306 340 IPR001881 GO:0005509
Apr1g0760 766 CDD STKc_IRAK 438 707 - -
Apr1g0760 766 Gene3D Laminin 309 349 - -
Apr1g0760 766 SUPERFAMILY Protein kinase-like (PK-like) 414 704 IPR011009 -
Apr1g0760 766 Pfam Wall-associated receptor kinase galacturonan-binding 31 96 IPR025287 GO:0030247
Apr1g0760 766 Pfam Protein kinase domain 434 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g0760 766 SUPERFAMILY EGF/Laminin 306 341 - -
Apr1g0760 766 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 16 739 - -
Apr1g0760 766 SMART egf_5 258 305 IPR000742 -
Apr1g0760 766 SMART egf_5 309 349 IPR000742 -
Apr1g0760 766 SMART egfca_6 306 349 IPR001881 GO:0005509
Apr1g0760 766 CDD EGF_CA 306 340 - -
Apr1g0760 766 Gene3D Transferase(Phosphotransferase) domain 1 508 730 - -
Apr1g0760 766 ProSitePatterns Calcium-binding EGF-like domain signature. 306 331 IPR018097 GO:0005509
Apr1g0760 766 Gene3D Laminin 256 308 - -
Apr1g0760 766 ProSiteProfiles Protein kinase domain profile. 432 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g0760 766 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 322 333 IPR000152 -
Apr1g0760 766 SMART serkin_6 432 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g0760 766 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 16 739 IPR045274 GO:0007166
Apr1g0760 766 Gene3D Phosphorylase Kinase; domain 1 406 507 - -
Apr1g0760 766 ProSitePatterns Serine/Threonine protein kinases active-site signature. 553 565 IPR008271 GO:0004672|GO:0006468
Apr1g0760 766 ProSiteProfiles EGF-like domain profile. 306 340 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0760 Apr-Chr1 9123470 9127528 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0760 11 759 Receptor kinase-like Gene Family AT1G21250 42.653 0.0 544
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Apr1g0760 Pkinase 2.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0760 - - gmx:100798027 871.692