Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr1g0755 | ATGGCCGTGCACTCAAAGCAGCTTCTGCAACTGCTACTTGTGGCAATCCTTATTGCAGCAACGAAAACCCAACCCATGTCAAAGACAAACTGCAGAGACAAGTGTGGCTCTGTCAACATTCCCTTTCCATTTGGCATGACCAAGGAATGTTCCTTGAACCCCTCATTTCTCATCATCTGCAACCAAACCTCTTTCACACACACGCACATACCTTTCTTGTATAATAATAATACTAATAATAGCGTGCCCTTGTTAAGCATCTCGCTCCTGGATGGCGAACTTCGCATTTCATTGCCAGTAGTCAAAGACTGTTATAACTATAGCTCTTACGAAGATCTTACTGATATCGGATGGAGGTTCTATTTCAACCTGACACCTTTTCAACTCTCACCCAACCGAAATAAATTAACAGTTGTTGGCGTTGACACCGCTGGATTTGTGGTACCATATACGAACACCGAAAATAAATATACTGCACCAATGTGCCTGTCTCTGTACACCAAAGATTTATTAGTGAATGGATCTTGCTCCGGCATTGGTTGTTGCCAGACTCCAATACAACAAGGGATATCCAGTTTCAGCTACTATACTGCTATGAACGTCATCAACGACAGTTCCTTCGCCCAAGAATTTAGCACCAAACCAATCGCATGCGGTTCTGCGTTCCTGGTGGAAAACGGAAGCTACAACTTCTTAGAGAAAGACCTCTTAAAGTTGGACAAGGAGGAGTTTCCTGTGGTTGTGGATTGGGCAGTGGGGAACCAAACATGCAAAGATTCTATGAATTTATCAAGTTATGCGTGTAAGGCAGACAACAGTAGATGTGACAATGCAACGGACGGAAACGGTTACCTTTGTCGTTGCCGTCCTGGCTTTCAAGGAAACCCTTATCTCCCTCATGGTTGCCTAGATGTTGACGAATGCAAGGGATCTAACGATTGCATTCATCGGGAAAAGTGCAAAAACTATCCGGGGAGTTACAATTGTTCATGCCGAAAAGGATTCGTAGGAGATGGAAAAGTAAATGGATCAGGATGCAAAAAAGATACGAACAGCAGAGACATCATACTCGTAACAACTTTGAGTGTGAGCATAGGCATCATAGCACTGCTGGGGGGAAGCTTTTATGTGTACTGGGCATTCAAGAAAAGAAAGCTCATGAAACTTAAGGAACACTTTTTTGAGCAAAATGGTGGTCTATTGTTACAACAACGAGTAGCGAGGCATAGAGGGTCAGAAATGACTAAAGTCTTCACAGTGGAGGAGCTAAAAAGGGCAACTAATAACTTCAATCCAGATAGGATACTAGGGCAAGGTGGTCAAGGAACAGTTTATAAAGGAGTGTTATTAGATAATAGAACTGTAGCGATAAAAAAATCCAAAATCAGTGATCCAAACCAGATTGAGCAGTTTATTAACGAGGTTATGTTGCTTTCCGAAATCAACCACAGGAATGTGGTAAAGCTCTTGGGTTGTTGTTTAGAGACAGAAGTTCCAATGCTTGTTTATGAATTCATTTCCAATGGTACTGTTTATGAGCATCTTCATGGTCAAAGCCAGTCCTTAAAACTTACATGGAAAACTAGATTAAGAATAGCAACAGAAACTGCTGAGGCCCTGGCATATTTGCATTCTGCTACTTCTGAACCAATCATCCACAGAGATGTGAAAACTACAAATATATTACTTGATCACAATCTCACAGCAAAGGTTTCTGATTTTGGAGCTTCAAGAATTGTTCCTCTAGATCAAACTCAATTAACCACTTTGGTGCAAGGAACGTTGGGGTATCTTGACCCTGAATACTTACACACAAGCCACTTAACTGAGAAGAGTGATGTTTATAGCTTTGGGGTTGTCCTAGCAGAACTACTCACAGGAAAAAAGGCACTCGCTTTTCACAAGCAAGAGTGTGTTACGAACCTTGCTCTGTTCTTCGTTTCTTCCATGAAAGAGGATCGATTACTTGACACTGTGGACCCTCACATAATTGATGAGGCGACCGCAAATGTTGACCAACTGATGGAATTTGCCAAAATTGCAAAACAGTGTTTAAAGGTGAAACGAGAAGAAAGACCCACCATGAAAGAAGTGGCAATGGAACTTGCGGGACTGAGATTTGCGGAAATGCACCAACGGGAAAGTGCCAATATGTGTTCAGAAGACACTGAGATTTCTCTCCAATCAGAAGCGTATGTTTTAAGTGTTGAAAATGACGCTGGTGGAAGTAGTGGTATCAGTTCTGGTGTTGATAGCTTAAACCAGATTTCGACGACCTTCCCCAGTGGAAGATGA | 2295 | 0.4205 | MAVHSKQLLQLLLVAILIAATKTQPMSKTNCRDKCGSVNIPFPFGMTKECSLNPSFLIICNQTSFTHTHIPFLYNNNTNNSVPLLSISLLDGELRISLPVVKDCYNYSSYEDLTDIGWRFYFNLTPFQLSPNRNKLTVVGVDTAGFVVPYTNTENKYTAPMCLSLYTKDLLVNGSCSGIGCCQTPIQQGISSFSYYTAMNVINDSSFAQEFSTKPIACGSAFLVENGSYNFLEKDLLKLDKEEFPVVVDWAVGNQTCKDSMNLSSYACKADNSRCDNATDGNGYLCRCRPGFQGNPYLPHGCLDVDECKGSNDCIHREKCKNYPGSYNCSCRKGFVGDGKVNGSGCKKDTNSRDIILVTTLSVSIGIIALLGGSFYVYWAFKKRKLMKLKEHFFEQNGGLLLQQRVARHRGSEMTKVFTVEELKRATNNFNPDRILGQGGQGTVYKGVLLDNRTVAIKKSKISDPNQIEQFINEVMLLSEINHRNVVKLLGCCLETEVPMLVYEFISNGTVYEHLHGQSQSLKLTWKTRLRIATETAEALAYLHSATSEPIIHRDVKTTNILLDHNLTAKVSDFGASRIVPLDQTQLTTLVQGTLGYLDPEYLHTSHLTEKSDVYSFGVVLAELLTGKKALAFHKQECVTNLALFFVSSMKEDRLLDTVDPHIIDEATANVDQLMEFAKIAKQCLKVKREERPTMKEVAMELAGLRFAEMHQRESANMCSEDTEISLQSEAYVLSVENDAGGSSGISSGVDSLNQISTTFPSGR* | 765 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr1g0755 | 764 | Pfam | Protein kinase domain | 432 | 698 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr1g0755 | 764 | SUPERFAMILY | Protein kinase-like (PK-like) | 412 | 702 | IPR011009 | - | |
Apr1g0755 | 764 | ProSitePatterns | Aspartic acid and asparagine hydroxylation site. | 320 | 331 | IPR000152 | - | |
Apr1g0755 | 764 | SMART | egfca_6 | 304 | 347 | IPR001881 | GO:0005509 | |
Apr1g0755 | 764 | Gene3D | Phosphorylase Kinase; domain 1 | 404 | 505 | - | - | |
Apr1g0755 | 764 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 | 16 | 737 | IPR045274 | GO:0007166 | |
Apr1g0755 | 764 | ProSitePatterns | Calcium-binding EGF-like domain signature. | 304 | 329 | IPR018097 | GO:0005509 | |
Apr1g0755 | 764 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 551 | 563 | IPR008271 | GO:0004672|GO:0006468 | |
Apr1g0755 | 764 | SUPERFAMILY | EGF/Laminin | 304 | 339 | - | - | |
Apr1g0755 | 764 | Gene3D | Transferase(Phosphotransferase) domain 1 | 506 | 729 | - | - | |
Apr1g0755 | 764 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED | 16 | 737 | - | - | |
Apr1g0755 | 764 | ProSiteProfiles | Protein kinase domain profile. | 430 | 705 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr1g0755 | 764 | CDD | STKc_IRAK | 436 | 705 | - | - | |
Apr1g0755 | 764 | Gene3D | Plasmodium vivax P25 domain | 247 | 353 | - | - | |
Apr1g0755 | 764 | SMART | serkin_6 | 430 | 708 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr1g0755 | 764 | CDD | EGF_CA | 304 | 338 | - | - | |
Apr1g0755 | 764 | ProSiteProfiles | EGF-like domain profile. | 304 | 338 | IPR000742 | - | |
Apr1g0755 | 764 | SMART | egf_5 | 307 | 347 | IPR000742 | - | |
Apr1g0755 | 764 | SMART | egf_5 | 256 | 303 | IPR000742 | - | |
Apr1g0755 | 764 | Pfam | Calcium-binding EGF domain | 304 | 338 | IPR001881 | GO:0005509 | |
Apr1g0755 | 764 | Pfam | Wall-associated receptor kinase galacturonan-binding | 31 | 96 | IPR025287 | GO:0030247 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr1g0755 | Apr-Chr1 | 9004992 | 9008992 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr1g0755 | 11 | 757 | Receptor kinase-like Gene Family | AT1G21250 | 43.025 | 0.0 | 555 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK | Apr1g0755 | Pkinase | 2.4e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr1g0755 | - | - | gmx:100798027 | 871.307 |