Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0739 ATGTCTCAGGGAAGAGGTAGTGCATCTTCACCCATGGCTATGCTCACTGTGATTTCACTACTGTGCCTGTTGCTTCTGGTGGAACATGCTAATGCAGCTACTTACACCGTTGGAGGATCTGGGGGATGGACCTTCAACACTAATTCTTGGCCCAGGGGAAAAAGGTTCAGAGCTGGTGATGTGCTAATCTTCAACTACGACTCAACCACCCACAATGTGGTTGCTGTGGACAGAAGTGGATACACCGATTGCAGGGCACCAGGGAATGCTCGAGTGTTCAGTTCAGGGAAGGACCAAATAAAGCTTGCAAGAGGGCAGAACTACTTCATATGCAACTTTCCTGGTCACTGTGAATCTGGGATGAAGATTGCCCTCAATGCAGTGTGA 387 0.4884 MSQGRGSASSPMAMLTVISLLCLLLLVEHANAATYTVGGSGGWTFNTNSWPRGKRFRAGDVLIFNYDSTTHNVVAVDRSGYTDCRAPGNARVFSSGKDQIKLARGQNYFICNFPGHCESGMKIALNAV* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0739 128 ProSiteProfiles Phytocyanin domain profile. 33 128 IPR003245 GO:0009055
Apr1g0739 128 Gene3D - 33 127 IPR008972 -
Apr1g0739 128 SUPERFAMILY Cupredoxins 33 127 IPR008972 -
Apr1g0739 128 PANTHER BASIC BLUE-LIKE PROTEIN 9 126 - -
Apr1g0739 128 ProSitePatterns Type-1 copper (blue) proteins signature. 105 121 IPR028871 -
Apr1g0739 128 CDD Plantacyanin 33 127 IPR041844 -
Apr1g0739 128 PANTHER BLUE COPPER PROTEIN 9 126 IPR039391 GO:0009055
Apr1g0739 128 Pfam Plastocyanin-like domain 43 121 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0739 Apr-Chr1 8822440 8823232 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0739 1 128 Phytocyanin Superfamily AT1G17800 41.007 6.47e-27 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0739 - - gmx:100788635 224.557