Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0735 ATGGTGCCTCCGGGGCCACCCACTCCCATTGGTGGTGCCCAGTCTGTTACACCCTCTCTTTTGAGATCAAATTCAGGAATGTTAGGAGCTCAAGGGGGTCCCATGCCTTCCCAGACATCTTTCCCTTCGCTTGTGTCACCGCGTACACAGTACAACAACATGAACATTCTAGGAAATATGTCTAATGTAACTTCGATACTGAATCAATCTTTCCCAAATGGAGTCCCGAATCCTGGGCTCTCTGGTCCAGGAAGTAGCCAGCGTGGAGGTATTGACGCTGGAGCTGAAGCAGATCCACTCTCCAACGTTGGCAATGGATTAAACTTTAATAATTCTTCGTCCACGTTTGTACAGTCAAACATAGTGAGTCCTGGTTCCTCTGGTCAAGGTCAGGCTCAACAATTTTCAAATCCTTCTAGTAATCAGCTCTTGCCAGAACAACAACATTCCCAGCCGCTTGAAACTCAAAATTTCCAACACAGTCAGCAGTCAATGCAGCAGTTCTCTTCTCCTCTGAATACACAGCAGCAGCATTTTCAAACAATTCGAGGAGGGATGGGTGGTATGGGACCAGTAAAGGTGGAGCCCCACGTAAACAACGATCAACTTGGACAGCAGCAGCAGTTGCAATCATTGAGGAATCTTGCTTCAGTGAAACTGGAACCACCACAGATGCAAACAATGAGAACTCTGGGACCAGTTAAAGTGGAGCCCCAGCATTCTGATCAACCATTATTTTTGCAGCAGCAACAGCAGCAGCAGCAACAACAGCAGCAACAATTCCTCCATATGTCAAGCCAGTCCTCTCAGGCTGCTGCCGCCCAGATCAATATTTTGCGCCATCATAGGCTTTTGCAGTTGCAGCAACAACACCAGCAGCAACAACTCTTGAAGGGAATGCCTCAACAACGGTCCCAACTACCACAACAATTTCAACAGCAGAATATGCCTGTAAGATCTCCTGTGAAACCAGTATATGAACCGGGGATGTGTGCTAGGCGGTTGACACATTACATGTATCAACAACAACATAGACCTGAAGACAACAATATTGACTTCTGGAGGAAGTTTGTTGCTGAGTATTTTGCTCCTAATGCCAAGAAGAAATGGTGTGTTTCTATGTATGGTAGTGGGAGACAAACAACTGGAGTTTTTCCTCAGGATGTATGGCACTGCGAAATATGTAATCGCAAACCAGGCCGTGGGTTTGAAGCAACTTTTGAGGTTCTTCCCAGGCTTTTCAAGATAAAGTATGAAAGTGGTACTTTGGAAGAACTACTTTATGTTGACATGCCCCGTGAATATCATAATTCCTCTGGTCAGATTGTTCTAGATTATGCAAAGGCAATACAAGAAAGTGTTTTTGACCAACTTCGTGTTGTTCGTGATGGTCAACTTCGAATAGTTTTCTCTCCAGACCTGAAGATATGTTCTTGGGAATTTTGTGCCCGGCGCCATGAAGAGCTAATCCCCAGAAGATTGTTAATACCGCAGGTTAGTCAGCTTGGAACGGTTGCTCAAAAATACCAGGCTTTTACTCAAAATGCAACGCCCAATGTATCTGTTCCAGAGTTACAAAATAATTGCAATATGTTTGTTGCATCAGCCCGTCAGTTGGCTAAAGCCTTAGAAGTACCATTAGTTAATGATTTAGGATATACTAAGAGATATGTGCGCTGCCTACAGATATCAGAAGTGGTAAATAGTATGAAAGACTTGATAGATTACAGCAGAGAAACAAGAACTGGACCTATGGAGAGTCTAGCAAAATTCCCTCGGAGGACAAGTGGATCATCTGGACCTCGCAGTCAAGCACTACAGCATGAAGATCAATTACAACAGCAGCAGCGACAACAGCAAATGGTGGCCCATAACTCAAATGGTGACCAAACCTTGGCACAAGCTGCCATCATGCAAATTGGTTCTAGCAATGGTGTGGTTAGTGTAAATAACTCTGTCAACTCAGCATCCGCATCAACCACCACAAGCACTATTGTTGGACTTCTTCACCAGAACTCTATGAATTCTAGACAACAAAATTCAATGAACAATGCAAGCAGTCCATATGGAGGTAGTTCTGTTCAGATTCCATCCCCAGGTTCCTCCAGTACTATGCCCCAGGCGCAGCCAAACTCATCCCCTTTTCAACCACCAACACCATCCTCATCTAACAATGCTCCACAAACATCTCTCCCTGCTTTAACATCTGCCAATCACATGAGTACAACAAACTCGCCAGCTAATATTTCCCTGCAACAGCAGCAGTCATCTCTTTCTGGTGAAGCTGACCCTAGTGATACTCAGAGTTCAGTCCAGAAAATCATACAAGAGATGATGATGTCCTCCCAGATTAATGGCACAGGTGGAATGGTGGGTGTTGGTTCTCTTGGGAATGACGTGAAGAACGTAAATGGCATTCTGCCAGTGAGTGCCAATACAGGGATCAATGGTGGCAATGGCCTGGTGGGGAATGGTGCATTGAACAGTAATTCAGGTGTTGGGGTTGGTAGTTATGGCACAATAGGTCTTGGTCAATCCACTATGCCTAATGGCATCAGAGCTGCAATGGTAAATAATCCGCTTATGAATGGAAGGGGAGGAATGGCGTCTATTGCTCGGGATCAAGCTATGAATCATCATCAAGATTTGTCAAACCAACTACTTAGTGGGCTAGGGGCAGTAAATGGTTTTAATAATCTTCAATATGATTGGAAACCTTCTCCTTGA 2727 0.4466 MVPPGPPTPIGGAQSVTPSLLRSNSGMLGAQGGPMPSQTSFPSLVSPRTQYNNMNILGNMSNVTSILNQSFPNGVPNPGLSGPGSSQRGGIDAGAEADPLSNVGNGLNFNNSSSTFVQSNIVSPGSSGQGQAQQFSNPSSNQLLPEQQHSQPLETQNFQHSQQSMQQFSSPLNTQQQHFQTIRGGMGGMGPVKVEPHVNNDQLGQQQQLQSLRNLASVKLEPPQMQTMRTLGPVKVEPQHSDQPLFLQQQQQQQQQQQQQFLHMSSQSSQAAAAQINILRHHRLLQLQQQHQQQQLLKGMPQQRSQLPQQFQQQNMPVRSPVKPVYEPGMCARRLTHYMYQQQHRPEDNNIDFWRKFVAEYFAPNAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATFEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFDQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGTVAQKYQAFTQNATPNVSVPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETRTGPMESLAKFPRRTSGSSGPRSQALQHEDQLQQQQRQQQMVAHNSNGDQTLAQAAIMQIGSSNGVVSVNNSVNSASASTTTSTIVGLLHQNSMNSRQQNSMNNASSPYGGSSVQIPSPGSSSTMPQAQPNSSPFQPPTPSSSNNAPQTSLPALTSANHMSTTNSPANISLQQQQSSLSGEADPSDTQSSVQKIIQEMMMSSQINGTGGMVGVGSLGNDVKNVNGILPVSANTGINGGNGLVGNGALNSNSGVGVGSYGTIGLGQSTMPNGIRAAMVNNPLMNGRGGMASIARDQAMNHHQDLSNQLLSGLGAVNGFNNLQYDWKPSP* 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0735 908 MobiDBLite consensus disorder prediction 592 626 - -
Apr1g0735 908 MobiDBLite consensus disorder prediction 68 84 - -
Apr1g0735 908 Pfam LIM-domain binding protein 334 588 IPR029005 -
Apr1g0735 908 MobiDBLite consensus disorder prediction 676 710 - -
Apr1g0735 908 MobiDBLite consensus disorder prediction 583 626 - -
Apr1g0735 908 PANTHER LIM DOMAIN-BINDING PROTEIN 1 907 IPR029005 -
Apr1g0735 908 MobiDBLite consensus disorder prediction 68 106 - -
Apr1g0735 908 MobiDBLite consensus disorder prediction 722 745 - -
Apr1g0735 908 MobiDBLite consensus disorder prediction 12 46 - -
Apr1g0735 908 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 1 907 - -
Apr1g0735 908 MobiDBLite consensus disorder prediction 236 260 - -
Apr1g0735 908 MobiDBLite consensus disorder prediction 1 46 - -
Apr1g0735 908 MobiDBLite consensus disorder prediction 242 260 - -
Apr1g0735 908 MobiDBLite consensus disorder prediction 751 770 - -
Apr1g0735 908 MobiDBLite consensus disorder prediction 295 316 - -
Apr1g0735 908 MobiDBLite consensus disorder prediction 118 164 - -
Apr1g0735 908 MobiDBLite consensus disorder prediction 676 745 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0735 Apr-Chr1 8780038 8788162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0735 1 904 C2H2 Transcription Factor Family AT1G43850 61.481 0.0 793
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0735 - - gmx:100787573 1408.28