Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0729 ATGTCGAGCACAGCTGCCCACGTCATCAAATGCAAAGCCGCGGTTGCATGGGAGGCTGGGAAGCCACTGGTGATTGAAGAAATAGAGGTAGCGCCACCACAGGCTGGTGAAGTGCGTTTGAAGATCCTCTACACCTCTCTTTGCCACACTGATGTTTACTTTTGGGAAGCTAAGGGCCAGACTCCATTGTTTCCTCGTATATTTGGTCATGAAGCTGGAGGGATTGTGGAGAGCGTAGGTGAGGGTGTGACCCATCTGAAACCAGGAGACCATGCCCTCCCTGTGTTCACTGGGGAGTGTGGGGAATGCTCACATTGTAAGTCGGAGGAGAGCAACATGTGTGATCTGCTAAGGATAAACACGGATCGTGGTGTCATGATCAATGACAACCAATCAAGATTCTCTATAAATGGAAAACCCATCTACCATTTTGTCGGTACCTCTACATTCAGTGAATACACTGTGGTCCACGCTGGATGTGTTGCAAAGGTCAACCCTGCTGCTCCACTTGATAAAATCTGTGTCCTCAGTTGTGGAATATGCACAGGTCTTGGAGCTACTGTCAATGTTGCTAAACCAAAACCTGGTTCTTCTGTTGCCATTTTTGGACTTGGAGCTGTTGGCCTTGCTGCTGCTGAAGGGGCAAGGATTTCTGGTGCATCAAGAATCATTGGGGTTGATTTAGTTTCCAGCAGATTTGAAGAAGCTAAAAAGTTCGGGGTCAATGAGTTTGTGAACCCAAAAGATCATGACAAACCTGTACAAGAGGTAATTGCTGAAATGACAAATGGAGGTGTGGATCGTGCTGTTGAATGTACTGGCAGCATCCAGGCCATGATCTCAGCTTTCGAATGTGTCCACGATGGTTGGGGTGTTGCTGTACTTGTTGGAGTGCCAAACAAAGATGATGCATTCAGAACTCATCCTATGAATTTCTTGAATGAGAGAACTCTTAAGGGTACCTTCTATGGTAACTACAAACCCCGCACTGATCTTCCTAGTGTTGTGGAAAAGTACATGAAAGGGGAACTAGAAATTGAGAAATTCATCACCCACACAGTTGCATTCTCTGAGATTAACAAAGCTTTTGATTATATGTTGAAAGGGGAGTCCATCAGATGCATCATTCGAATGGGAGAGTAA 1143 0.4576 MSSTAAHVIKCKAAVAWEAGKPLVIEEIEVAPPQAGEVRLKILYTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTHLKPGDHALPVFTGECGECSHCKSEESNMCDLLRINTDRGVMINDNQSRFSINGKPIYHFVGTSTFSEYTVVHAGCVAKVNPAAPLDKICVLSCGICTGLGATVNVAKPKPGSSVAIFGLGAVGLAAAEGARISGASRIIGVDLVSSRFEEAKKFGVNEFVNPKDHDKPVQEVIAEMTNGGVDRAVECTGSIQAMISAFECVHDGWGVAVLVGVPNKDDAFRTHPMNFLNERTLKGTFYGNYKPRTDLPSVVEKYMKGELEIEKFITHTVAFSEINKAFDYMLKGESIRCIIRMGE* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0729 380 Gene3D - 19 370 - -
Apr1g0729 380 CDD alcohol_DH_plants 9 377 - -
Apr1g0729 380 Gene3D - 183 321 - -
Apr1g0729 380 Pfam Zinc-binding dehydrogenase 206 330 IPR013149 -
Apr1g0729 380 Pfam Alcohol dehydrogenase GroES-like domain 36 163 IPR013154 -
Apr1g0729 380 SUPERFAMILY GroES-like 4 187 IPR011032 -
Apr1g0729 380 SUPERFAMILY GroES-like 328 377 IPR011032 -
Apr1g0729 380 PANTHER ALCOHOL DEHYDROGENASE-RELATED 5 378 - -
Apr1g0729 380 PANTHER ALCOHOL DEHYDROGENASE 5 378 - -
Apr1g0729 380 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 169 343 IPR036291 -
Apr1g0729 380 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 69 83 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0729 Apr-Chr1 8688863 8691812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0729 1 327 Monolignol Biosynthesis Gene Families AT1G72680 25.532 5.81e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0729 K18857 - gmx:100783858 741.11