Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0697 ATGAAATATATACTTCTTCTCCTTGTCACTTTCAAGATTATCAAGAAGAAACTCACAAAGCTACAGGAGGTTATGGGGTTTCAAACATCACATGGCACTAAATGGATAGCACACCCAATTTTCAAAGCAAAGGAGGACTCAACACTGAACTTGGCTGATCATACCCAAGCCAATACCAACTTAATTCCCGCTTGCTATGATTCATGGGTGGTAAAGCACCCTTCCGCATTGAACTCATTTGATAGACTGATGAAAGCTGCCATTGGGAAGAGGATAGTCGTATTTTTAGACTACGATGGCACCTTATCACCAATTGTCAATGACCCTGATCGCGCTTTCATGTCTGATGAGATGCGCGCAGCTGTACATGAAGTTGCTACTTATTTTCCAACAGCAATAATCAGTGGAAGAAGCAGAGACAAGGTGAAAGATTTCGTGAAGTTAAATAATTTATATTATGCTGGGAGCCATGGCATGGATATAATGGCTCCATCAATGCCAGTTAGGTCATCTGAAGGCAAGCACTGTGACATTGCTCGTAATACAAATGGCACTGAAGTTCCCTTTCAACCTGCGAAGAAGTTTTTGCCAGCAATTCGAGAGATATTAAGAAGACTAGAGAATGAAGTAAAGGAAATAAAAGGTGCAATGGTAGAGGACAACGGATTCTGCATCTCTGTACATTTCCGGCAGGTTAAAGAAAAGGATTATTACGTTTTGGAAGAGAAAGTGAAGTCAGTGCTTGAACAGAATCCTCAATTCTGCTTAACTGAGGGCAAAAAGGTTATGGAAATAAGGCCATCTATAGAATGGAACAAAGGAAATGCTGTGGAATATTTTCTTGATACATTAGGATTAAGCAGTTGCAGTGATATCCTTCCTGTGTATATTGGCGATGACAGAACTGATGAAGATGCTTTTAAGGTCATACAGAGCAGAGGACAAGGTTATCCAATTATAGTGTCTTCAATTCCAAGAGAAACAAACGCTTTGTACTCTTTGCGTGACCCATCAGAAGTACTAATCTTCTTGTCGCGGCTAGCGAAATGGAGGAAAACCTCTTACTCAAGCAGGCCTTTAAATTTTAGTTAA 1092 0.402 MKYILLLLVTFKIIKKKLTKLQEVMGFQTSHGTKWIAHPIFKAKEDSTLNLADHTQANTNLIPACYDSWVVKHPSALNSFDRLMKAAIGKRIVVFLDYDGTLSPIVNDPDRAFMSDEMRAAVHEVATYFPTAIISGRSRDKVKDFVKLNNLYYAGSHGMDIMAPSMPVRSSEGKHCDIARNTNGTEVPFQPAKKFLPAIREILRRLENEVKEIKGAMVEDNGFCISVHFRQVKEKDYYVLEEKVKSVLEQNPQFCLTEGKKVMEIRPSIEWNKGNAVEYFLDTLGLSSCSDILPVYIGDDRTDEDAFKVIQSRGQGYPIIVSSIPRETNALYSLRDPSEVLIFLSRLAKWRKTSYSSRPLNFS* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0697 363 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 54 358 - -
Apr1g0697 363 Gene3D - 92 180 IPR023214 -
Apr1g0697 363 Gene3D - 181 359 IPR023214 -
Apr1g0697 363 Coils Coil 196 216 - -
Apr1g0697 363 Pfam Trehalose-phosphatase 95 338 IPR003337 GO:0003824|GO:0005992
Apr1g0697 363 CDD HAD_TPP 93 340 - -
Apr1g0697 363 SUPERFAMILY HAD-like 93 351 IPR036412 -
Apr1g0697 363 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 94 311 IPR006379 -
Apr1g0697 363 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 54 358 IPR044651 GO:0004805|GO:0005992
Apr1g0697 363 TIGRFAM T6PP: trehalose-phosphatase 89 349 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0697 Apr-Chr1 8319392 8323409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0697 90 359 Trehalose Biosynthesis Gene Families AT1G23870 28.028 8.65e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0697 K01087 - gmx:100809194 599.356