Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0696 ATGGAATGCAACAAAGATGAGGCAGTTAGAGCCAAAGAAATAGCAGAGAGGAAATTTTTAGAAAGAGAATATGTTGGTGCAAAAAAGTTTGCTCACAAGGCCCAAAATCTGTATCCTGATTTGGAGGATATTTCCCAGTTTTTGACAACTCTTGATATTTATATATCTGCTGAGAATAAAGTAAGTGGAGAAATGGATTGGTATGGTATACTTGGAGTGAGCCCCTTTGCTGATGAGGAGATTGTCAGAAAGCAGTACAGGAAGCTGGCTCTCACCCTGCACCCTGATAAAAACAAGTGTTTAGGTGCAGAGGGTGCTTTTAAGCTGGTTTCGGAGGCATGGAGTTTGTTATCAGACAAGACCAAGAGACTAGAATATAACCAGAAGAGGTGTTTGAAAGGATTCCAACATAATACTCCCAACCATGTTGGATCTCAACCTGATGCACCCAGTTCAAATGGTTTTTATAATTTAAAGAAGAATGCATCTTCAAATGTGGGGACTGGAAACAATAATGGTCGTGCAACTTCAACTTCACTTCCTCCTCCACATAAAAAGGCTGAAACCTTTTGGACTATCTGTAATCGGTGCAGGACACATTATGAATATCTCAGGATTTATTTGAATCACACCCTTTTATGTCCAAACTGTAATGAAGCTTTTGTGGCTGTAGAGAGGGGTCCACCTCCTAATGTTTTTAAGCCATCAAATTGGTCTTCTCATCAACGACATCAGAATTCTCAACATCATGCTGGAAGAAACAATACAAACTTTCAGTGGGGTTCTCACTCCAGAATGGCTGGTTTTGGTAGCACAGATGGATCAACATCTGTTACAGCTCAAGCTGCAAGTGTTGTGCAGCAGGCAAGTGAGAAAGTGAGGAGAGACGGAGCATCATCAATTGCTGACTGGGAGAGAAGTCAAATGTCTAAGAGGACTGATGGCTCCTTTCATAAAGTTGAAAAACCTATGAAAAAAAGGAAGACAGATGATATTCGGATTAATGGTTATCAAGGATACATGGCAAATCATATGACTATGGGACATGGAGCGGCAGGTGTGGGCAGTTTTTCTGAACCAGGAAAGAGTAACTTGGAAGTAGAAAGAAATCATGGTTTTTCAGGTTTTGCTGGCAAGCATTTTGCCACAAGAGAGTTGTCATTGTTTGAAATCCGAAACATGCTGATGGACAAGTCACGCGTTGAAATTCGTAAGAAACTTCAAGAATGGAAATCAGTGGCTGAAGCTAAGATCAACAAGGACAAAGAGAATAGGAGACAGAAAAGCACCGGTAATGGCAAAACAAGTGGTTCAGAGAAGCTTGGAGATTCCACTGTTAATGGTAACAGGCATGCCGACATTGATTCTTTCCCTGTCACATCTGATGATACCATCAAGAAGAACCAGACCTATGTTACGATCAATGTTCCAGACCCTGATTTTCATAACTTTGACTTGGATAGAGATGAAAATTCCTTTGCAGAGGACCAGGTCTGGGCTGCTTATGATGATGATGATGGGATGCCTCGGTATTATGCTAGAGTTCACAAAGTGATCTCCATAAAACCATTTAAAATGCGGATCAGTTGGCTTAACTCTAGAAGCAACAATGAATTGGGCCCAATAGATTGGGTTGGTTCTGGTTTTTATAAAACTTGTGGGGATTTCAGGACTGGCAAGCATGAAATAACTGAATCATTAAATTCATTTTCACACAAGGTTAGGTGGACTAAAGGCACCAGAGGTGTTGTTCGCATTTTTCCTGGAAAGGGGGAAGTCTGGGCACTCTACAGAAACTGGTCTTCTGATTGGAATGAACATACCCCGGATGAAGTGATACACAAGTATGACATGGTGGAGGTGCTTGAAGATTTCAATGAAGAACAAGGCATATTAGTTACCCCTCTTATTAAGGTTGCTGGTTTCAGGACAGTGTTTAAGAGGCACATGGACCATGATCAGGTGAGAAGGATCCCTAAGGAGGAGATGTTTCGATTCTCTCATCAGGTTCCTAATTACTTGCTAACTGGCCAAGAAGCTAATAATGCTCCAATTGGTTGTCGAGAGTTGGATCCAGCAGCTACTCCTTTAGACCTACTTCAGATAATAACAGGAGCTAATGAGACATCCGGTAATGTTTAG 2142 0.4132 MECNKDEAVRAKEIAERKFLEREYVGAKKFAHKAQNLYPDLEDISQFLTTLDIYISAENKVSGEMDWYGILGVSPFADEEIVRKQYRKLALTLHPDKNKCLGAEGAFKLVSEAWSLLSDKTKRLEYNQKRCLKGFQHNTPNHVGSQPDAPSSNGFYNLKKNASSNVGTGNNNGRATSTSLPPPHKKAETFWTICNRCRTHYEYLRIYLNHTLLCPNCNEAFVAVERGPPPNVFKPSNWSSHQRHQNSQHHAGRNNTNFQWGSHSRMAGFGSTDGSTSVTAQAASVVQQASEKVRRDGASSIADWERSQMSKRTDGSFHKVEKPMKKRKTDDIRINGYQGYMANHMTMGHGAAGVGSFSEPGKSNLEVERNHGFSGFAGKHFATRELSLFEIRNMLMDKSRVEIRKKLQEWKSVAEAKINKDKENRRQKSTGNGKTSGSEKLGDSTVNGNRHADIDSFPVTSDDTIKKNQTYVTINVPDPDFHNFDLDRDENSFAEDQVWAAYDDDDGMPRYYARVHKVISIKPFKMRISWLNSRSNNELGPIDWVGSGFYKTCGDFRTGKHEITESLNSFSHKVRWTKGTRGVVRIFPGKGEVWALYRNWSSDWNEHTPDEVIHKYDMVEVLEDFNEEQGILVTPLIKVAGFRTVFKRHMDHDQVRRIPKEEMFRFSHQVPNYLLTGQEANNAPIGCRELDPAATPLDLLQIITGANETSGNV* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0696 713 MobiDBLite consensus disorder prediction 430 451 - -
Apr1g0696 713 Pfam Domain of unknown function (DUF3444) 473 679 IPR024593 -
Apr1g0696 713 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Apr1g0696 713 SMART dnaj_3 65 122 IPR001623 -
Apr1g0696 713 MobiDBLite consensus disorder prediction 297 328 - -
Apr1g0696 713 MobiDBLite consensus disorder prediction 236 256 - -
Apr1g0696 713 MobiDBLite consensus disorder prediction 418 461 - -
Apr1g0696 713 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Apr1g0696 713 Gene3D DnaJ domain 63 175 IPR036869 -
Apr1g0696 713 CDD DnaJ 66 119 IPR001623 -
Apr1g0696 713 MobiDBLite consensus disorder prediction 137 182 - -
Apr1g0696 713 Pfam DnaJ domain 66 127 IPR001623 -
Apr1g0696 713 SUPERFAMILY Chaperone J-domain 56 126 IPR036869 -
Apr1g0696 713 PANTHER BNAC03G44070D PROTEIN 1 707 - -
Apr1g0696 713 PRINTS DnaJ domain signature 68 86 IPR001623 -
Apr1g0696 713 PRINTS DnaJ domain signature 86 101 IPR001623 -
Apr1g0696 713 PRINTS DnaJ domain signature 102 122 IPR001623 -
Apr1g0696 713 PANTHER HEAT SHOCK PROTEIN-LIKE 1 707 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0696 Apr-Chr1 8298679 8303867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0696 4 229 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.051 8.09e-29 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0696 - - gmx:100818585 1249.57