Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0695 ATGGTATGCGGCGGTGATGTGAGGTCTATGGTTCTTCAACTCGGAATTGCGATTCGATTTGGAACCTTCAACAAAGGCCTCTCACTTCAACAACATCTCAATTGCATCCGCATTCCAAGCATCGCTCATTTTCCGAATCGTGGATTCAAGACCATCACAAGAGTAATGGATGACAACTCTTCTATGCCGCGTGTAGCAACCCCTGTGCTCGATATCATGGGTTTTCCCAGTGGTGCCTGGAAAAGCAGCGAAGATGGAAGACTTAGCTGTGGATATTCAAGTTTTAGGGGGAAGAGAGTGACCATGGAGGATTTCTATGATATAAAGACATCAAAGATAGACGGTCGATTGGTGAGCTTATTTGGAATATTTGATGGTCATGGTGGTTCTCGTGCTGCTGAGTATTTAAAGGAGCATCTATTTGATAATCTCCTGAAGCATCCAAAGTTTTTGAAGGATACTAAATCTGCCATAAGTGAAACATATCAGCAGACTGATGCCGACTTTCTGGATTATGAAAAAGATACTTTCCGGGACGATGGTTCCACAGCTTCAACAGCAGTTTTGGTTGATAACCATCTTTATGTTGCTAATGTCGGAGATTCTAGAACTATAATATCAAAAGCAGGAAAAGCAATTGCTCTCTCTGAGGATCATAAGCCTAATAGGAGTGATGAGCGGAAGAGAATAGAGAATGCTGGCGGTGTTGTCATGTGGGCAGGTACTTGGAGGGTTGGAGGGGTGCTAGCAATGTCTCGTGCTTTTGGCAATCGTATGCTGAAGCCGTTTGTCGTAGCAGAACCGGAGATCCAGGACCAGGAGATAGATGAAGAAACTGAGCTGCTTGTTCTTGCAAGTGATGGACTCTGGGATGTAGTACCAAATGACGATGCTGTTTCTCTTGTCCGAACAGAAGAGGAGGCGGAGACAGCTGCTCGTAAGTTAACAGAAGCGGCATTTACCCGTGGCAGTGCAGATAACATAACTTGCATTGTGGTGCGTTTCAATCATGAAAAAGCATACCCAGTTAATTCTGACAAAGCAGATCCAGCTAGTAGTAGCCAGCATGAATAG 1074 0.4451 MVCGGDVRSMVLQLGIAIRFGTFNKGLSLQQHLNCIRIPSIAHFPNRGFKTITRVMDDNSSMPRVATPVLDIMGFPSGAWKSSEDGRLSCGYSSFRGKRVTMEDFYDIKTSKIDGRLVSLFGIFDGHGGSRAAEYLKEHLFDNLLKHPKFLKDTKSAISETYQQTDADFLDYEKDTFRDDGSTASTAVLVDNHLYVANVGDSRTIISKAGKAIALSEDHKPNRSDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKPFVVAEPEIQDQEIDEETELLVLASDGLWDVVPNDDAVSLVRTEEEAETAARKLTEAAFTRGSADNITCIVVRFNHEKAYPVNSDKADPASSSQHE* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0695 357 SMART PP2C_4 79 333 IPR001932 -
Apr1g0695 357 PANTHER ALPHABET, ISOFORM E-RELATED 81 341 - -
Apr1g0695 357 CDD PP2Cc 89 335 IPR001932 -
Apr1g0695 357 Gene3D - 81 342 IPR036457 -
Apr1g0695 357 SMART PP2C_SIG_2 87 335 IPR001932 -
Apr1g0695 357 ProSitePatterns PPM-type phosphatase domain signature. 120 128 IPR000222 GO:0043169
Apr1g0695 357 SUPERFAMILY PP2C-like 84 337 IPR036457 -
Apr1g0695 357 Pfam Protein phosphatase 2C 91 328 IPR001932 -
Apr1g0695 357 ProSiteProfiles PPM-type phosphatase domain profile. 89 335 IPR001932 -
Apr1g0695 357 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 81 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0695 Apr-Chr1 8278683 8290697 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0695 1 339 PP2C-type Phosphatase Gene Family AT5G53140 66.102 3.23e-163 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0695 K17506 - gmx:100805795 504.212