Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0690 ATGGACACTTCTTTGCTAGCAGTATCATCCCATTCTATTGGATTGTTGTTTATGGTTTGCTTCAGTGTAGAGCTTGCACTTGTTATTGGCATTGTCAACAATTGTTCAGAATCATCATGTGGAAACTTGGTGATTCGATTCCCTTTTCGAATCAAAGGGCGGCATCCCCAACACTGTGGCTATCCTGGCTTTGATTTATTTTGTTCAGCAAGTAACAAAACTGTGATTGAACTGACAGAGTCAGTGAAGCTCAGTGTCAATAATATTAACTACAAACACCAAATTATAGAATTATCTGATCCAAATGATTGCCTTTCGAGGCAGCTCCTAAACCTCAAGCTCAGTCTATCAGCTTCACTTTTCCAATTCAAGCCCAGCTACCATGTACATGGTGACTATAACTTTTTCAATTGTTCATCAATGAAAAGAAGTTTGAACTCTTATTTAGTTCCATGTCTCAGCCCAAGTGACTCAACCTCTCGAGTATATGCTATTCCATCCGATACACGCATGGAGAACCTGGAACTGACATTTTGTACCAAAATGTTAAATATTTCATCCTCCCCTTTTGATTTTCTTAAAGAGAATATTCTCGTTCTGACATGGTCTGAGCCAAACTGTGAACATTGTGAATCAAAAGGGAATAGATGTGGGTGGAAGAATGATACTGCCATGCTAGTGAAAGAAATACATTGCTTCTCCAATCACAAAGGTTCATCAACAGCTCTTGCCACCACAGGATCTGTCCTAGGATCGTTGTTTCTCATCCTCCTGACCGGTGCAGTTTACCACATGTATGACTCTTACAGACAGCAAAAGGAAAAACAAACAATTGTTGAAAAATTTTTAGAAGACTACAGAGCTCTTAAGCCCACCAGATACTCATATGCTGAAATTAAGCGAATCACCAATAACTTTGAGGACAAGTTAGGAGTGGGAGCCTATGGAACTGTGTTTAGAGGAAGCATTTCCAAAGAATTTATTGTTGCTGTAAAGATGCTGAATAATTCCCAAGGAAATGGAGAAGAGTTCATTAATGAAGTTAGTACAATGGGCAGAATCCACCATGTTAACATTGTTCGATTGGTCGGTTTTTGTGCAGATGGATTTAGAAGAGCTCTTGTTTATGAGTTCTTACCAAATGGTTCACTGCAGAAGTTCATAAATTCACCAGACAACAGGCAGAACTTCCTTGGTTGGAAAAGGCTGCAGGACATTGCTTTAGGCATAGCCAAAGGAATTGAGTATCTTCACCAAGGTTGTGATCAGCGCATTCTCCATTTTGACATTAAGCCTCAAAATGTGTTACTCGACCAAAACTTCACTCCAAAAATATGTGACTTCGGTCTAGCCAAATTGTGTTCAAGGGATCAGAGCATAGTGTCAATGACCACAGCACGAGGAACTCTGGGGTACATTGCTCCTGAAGTTTTCTCACGAAAATTTGGAAACGTGTCATACAAGGCAGATGTTTATAGCTATGGAATGATGCTTCTTGAAACAGTAGGGGGGAGGAAGATCACTGAGGACTTAGAGGAAAACATCAGCCATGTTTACTACCCAGAATGGATTCATAATCTTTTAGAAGAACGTGAGGAAAAGAGAATTCACATAGATTATGAAGGGGATGAAAAAATTGCAAAGAAACTAGCAATTGTGGGACTTTGGTGCATCCAGTGGCATGCTATGGATAGACTATCCATGCAAGTGGTTGTTCAAATGTTAGAGGGAGACATAAACAGATCCTCAATGCCTCCTAATCCCTTTGCTTCTGCAGGACCAAGGAGAACAAGTGCAAGTGCAAGTTTGGGTGAGACTGCTAGACAACTAATCCAAGACTTCGATGTTATCCATGAGCTCGAGTAA 1866 0.4025 MDTSLLAVSSHSIGLLFMVCFSVELALVIGIVNNCSESSCGNLVIRFPFRIKGRHPQHCGYPGFDLFCSASNKTVIELTESVKLSVNNINYKHQIIELSDPNDCLSRQLLNLKLSLSASLFQFKPSYHVHGDYNFFNCSSMKRSLNSYLVPCLSPSDSTSRVYAIPSDTRMENLELTFCTKMLNISSSPFDFLKENILVLTWSEPNCEHCESKGNRCGWKNDTAMLVKEIHCFSNHKGSSTALATTGSVLGSLFLILLTGAVYHMYDSYRQQKEKQTIVEKFLEDYRALKPTRYSYAEIKRITNNFEDKLGVGAYGTVFRGSISKEFIVAVKMLNNSQGNGEEFINEVSTMGRIHHVNIVRLVGFCADGFRRALVYEFLPNGSLQKFINSPDNRQNFLGWKRLQDIALGIAKGIEYLHQGCDQRILHFDIKPQNVLLDQNFTPKICDFGLAKLCSRDQSIVSMTTARGTLGYIAPEVFSRKFGNVSYKADVYSYGMMLLETVGGRKITEDLEENISHVYYPEWIHNLLEEREEKRIHIDYEGDEKIAKKLAIVGLWCIQWHAMDRLSMQVVVQMLEGDINRSSMPPNPFASAGPRRTSASASLGETARQLIQDFDVIHELE* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0690 621 SMART serkin_6 304 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g0690 621 SUPERFAMILY Protein kinase-like (PK-like) 286 576 IPR011009 -
Apr1g0690 621 PANTHER RUST RESISTANCE KINASE LR10-RELATED 26 621 IPR045874 GO:0004672
Apr1g0690 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 425 437 IPR008271 GO:0004672|GO:0006468
Apr1g0690 621 MobiDBLite consensus disorder prediction 583 602 - -
Apr1g0690 621 Gene3D Phosphorylase Kinase; domain 1 277 378 - -
Apr1g0690 621 Gene3D Transferase(Phosphotransferase) domain 1 379 584 - -
Apr1g0690 621 ProSiteProfiles Protein kinase domain profile. 304 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g0690 621 Pfam Protein kinase domain 307 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g0690 621 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524
Apr1g0690 621 PANTHER SERINE/THREONINE KINASE, PUTATIVE-RELATED 26 621 - -
Apr1g0690 621 Pfam Wall-associated receptor kinase galacturonan-binding 35 100 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0690 Apr-Chr1 8219686 8222020 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0690 4 602 Receptor kinase-like Gene Family AT1G66910 36.460 1.27e-114 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Apr1g0690 Pkinase 7.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0690 - - lang:109328752 823.542