Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0689 ATGTCATCTTCCTTCGCAGCGTTTTTTGTGCTCCTAATCCTATTCTATGGAAACTGCAGGTGCAATGCAACAGAAGATACTGAACTCTGTTCTCGCTGGTGTGGGATTCACAACATAACCCACCCTTTCCGGTTACAAGACAGTCCAGACACGTGTGGTGATACGAGGTACAACCTATCCTGCGAGGACAACCAATTGATGCTCTATTTGGGCTTCGGAAAATACCATGTTAAGTCGATTAATTACGACAACTACACAATTCGAGTAGTGGATGTTAATGTTGGAGCGCATGATTACTCTTCCCTCCCTTCTTACTCTTTGGGACAATACAATTTCAATGAATATGAGCCATATCGAGTGGATCGGGATTATCGCAGCAACATTTTGGCGAAGTCTATGATGTATTTGTGGTGTCCAAGTCGAGTGGATTCATGTGATCTTTACGTTGGGGACAATGAAAGTTGCGTATGGTATGCGATTGGGAGCACTTTCTATCTGAATGTTGATGGAAGACCAATTCGGGATTTGGGGCTGAGAGACTCGTGTCGGATAGAGTTGCAGTATATGACATCGTGGCCTAATGAAATCAGCCACGGAAACATTTCATGCACTGACATACATGAAATGCTGCTTTATGGTTTTGAACTTTCTTGGGTTAATAGTCTCTGTCCAGTTAATTCGTACTTCGTACTCGCCCACGATCCCCAACCTCTCTGTTTACGTCTTCCAGGTTTGCTTCCCCTTTTGGCTGCTATATTTTGTGGTGCCAAGATGATATTTGGAGCTCCATGTGTCACTGCTTTATTTATCTACAAATGGCGACGAAGGCATTTGTCTATTTATGATAGCATTGAAGATTTTCTACGAAGTGATAATAACATTATACCCATAAGGTACTCTTACAAAGACATCAAGAGGATAACAAGGCAATTCAAGATTAAACTAGGGAATGGAGGCTATGGTTCAGTCTTCAAAGGACAACTTCGAAGTGGACGTGTTGTAGCTGTTAAGATATTGAATAAAGCCAAAGCCAATGGCGAGGAATTCATCAACGAAGTTGCTACCATTGGTAGGATTCACCACATTAATGTGGTGCAACTCATTGGTTTTTGTGTGGAGGGATCAAATCGTGCTCTTATATATGAGTTCATGCCAAATGGATCTCTTGAAAAATACATTTTCTCTCATGAAGAGAGTTCTTCCTTAAGTTGTGATAAATTGTATGACATATCTCTTGGAGTGGCCCGTGGCATTGAATACCTACATAATGGATGCAACATGAAAATTTTACACTTTGACATAAAGCCTCATAACATTCTTCTTGATGAGAATTTCAATCCAAAAGTTTCTGATTTTGGTCTTGCAAGATTTTGTCCTAATAATAATAGCATTGTGTCTTTGACAGCAGCAAGAGGAACTATAGGATACATGGCACCTGAACTCTTCTATAGAAATGTTGGTACAATCTCCTACAAAGCTGATGTTTATAGCTTTGGCATGTTATTGATGGAGATGGCCAGTAGAAGAAAGAACTTGAATGTATTGGCTGAACAATCTAGCCAAATTTATTTCCCTTATTGGGTGTATGATAGGTTACATGATGGAAGGGAAATTACAATTGAAAATGACACAGAAGAGGAGATGAAACTGGCAAAGAAAATGATAATTGTAGCCTTGTGGTGTATACAAACAAAGCCAGGTGATCGTCCTCCAATGGATAAAGTGTTAGGGATGCTTGAAAAAGATGAAGAATTACGAACGCCAAGTAAACCTTTTTTATATCCACAAGATCTATCAAATGAGGATACTAGAAATCATTGTAGTTTAGGATCATCCTATGATGTATCAGTAAGTAAATCCACGAAGTCAATTTGA 1875 0.3947 MSSSFAAFFVLLILFYGNCRCNATEDTELCSRWCGIHNITHPFRLQDSPDTCGDTRYNLSCEDNQLMLYLGFGKYHVKSINYDNYTIRVVDVNVGAHDYSSLPSYSLGQYNFNEYEPYRVDRDYRSNILAKSMMYLWCPSRVDSCDLYVGDNESCVWYAIGSTFYLNVDGRPIRDLGLRDSCRIELQYMTSWPNEISHGNISCTDIHEMLLYGFELSWVNSLCPVNSYFVLAHDPQPLCLRLPGLLPLLAAIFCGAKMIFGAPCVTALFIYKWRRRHLSIYDSIEDFLRSDNNIIPIRYSYKDIKRITRQFKIKLGNGGYGSVFKGQLRSGRVVAVKILNKAKANGEEFINEVATIGRIHHINVVQLIGFCVEGSNRALIYEFMPNGSLEKYIFSHEESSSLSCDKLYDISLGVARGIEYLHNGCNMKILHFDIKPHNILLDENFNPKVSDFGLARFCPNNNSIVSLTAARGTIGYMAPELFYRNVGTISYKADVYSFGMLLMEMASRRKNLNVLAEQSSQIYFPYWVYDRLHDGREITIENDTEEEMKLAKKMIIVALWCIQTKPGDRPPMDKVLGMLEKDEELRTPSKPFLYPQDLSNEDTRNHCSLGSSYDVSVSKSTKSI* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0689 624 PANTHER RUST RESISTANCE KINASE LR10-RELATED 251 605 IPR045874 GO:0004672
Apr1g0689 624 PANTHER RUST RESISTANCE KINASE LR10-RELATED 7 223 IPR045874 GO:0004672
Apr1g0689 624 MobiDBLite consensus disorder prediction 590 624 - -
Apr1g0689 624 Pfam Protein kinase domain 312 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g0689 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 429 441 IPR008271 GO:0004672|GO:0006468
Apr1g0689 624 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 7 223 - -
Apr1g0689 624 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 251 605 - -
Apr1g0689 624 ProSitePatterns Protein kinases ATP-binding region signature. 315 337 IPR017441 GO:0005524
Apr1g0689 624 MobiDBLite consensus disorder prediction 593 624 - -
Apr1g0689 624 Pfam Wall-associated receptor kinase galacturonan-binding 30 91 IPR025287 GO:0030247
Apr1g0689 624 CDD STKc_IRAK 315 581 - -
Apr1g0689 624 Gene3D Transferase(Phosphotransferase) domain 1 384 590 - -
Apr1g0689 624 Gene3D Phosphorylase Kinase; domain 1 282 383 - -
Apr1g0689 624 SMART serkin_6 309 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g0689 624 SUPERFAMILY Protein kinase-like (PK-like) 291 580 IPR011009 -
Apr1g0689 624 ProSiteProfiles Protein kinase domain profile. 309 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0689 Apr-Chr1 8214633 8217682 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0689 191 593 Receptor kinase-like Gene Family AT4G18250 44.125 1.03e-107 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Apr1g0689 Pkinase 5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0689 - - aip:107607706 744.577