Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0686 ATGGATACTTGTTTAGTAATAGCATCCTCTTCCGTTGTTGGATTGTTGTTGATGGTTTGCTTTAATGTAGAGCTTGCATTTGGCATCAGTATGATCAACAAATGTTTAGATTTATCATGCGGAAATCAGGTGATTCGATTCCCTTTCCGAATCAAAGGACGCCATCCACAACAGTGTGGCTATCCGGGCTTCGACTTATCTTGTTCAACTAGTAACGAAACTGTGATTGAACTCCATAAATCAGTGATGCTCAGAGTCAACAGTATTGACTACAAACACCAAACGATTGCATTATCTGATCCATACGGTTGCCTTTCCAAGCACCTACCGAACCTCAATCTATCAGGTTCACATTTCCAGTTCAAGCCCGACTACTATGCAGACAGTAGCTATAACTTTTTCAATTGTTCAAAACCAACTAATAGAGATTTGAACTATTATTTGGTTCCATGCCTAACCACCTCAACCTCTCAAGCGTATGCTATTCCATCTCGCGAGATGATCCAGGACTTGCCCCTGTCATTTTGTACAAAAATGTTTAACATTTCATTCTTCCCTTTTAATTCCTTAAAGGACAACGTTCTTCTTTTAATGTGGTCTGCTCCAAACTGTAAGCATTGCGAATCAAAAGGGAACACGTGTGGTTGGAAGTGGAACAACTATACTGCCAAGCATGAAATATTTTGTTTCAGCAATCCCAGAGGTTCATCCACAGCCCTATTGACCACAGGATCAGTCCTAGGATCGTTCTTTCTTGTCCTGTTGACTGGTGGAGTCTACCACATCTATGACTCTTACAAACTGCAAAAAGAAAAGCAAGCAATTATTGAAAAATTTCTAGAAGACTACAAGGCTCTTAAGCCCACTAGGTACTCGTATTTGGAAATTAAGAGAATCACCCATAATTTTAAGGACAAGTTAGGAGAGGGAGCCTTTGGAATTGTGTTTAAAGGGAGTATTTCCGAAGAAATTATTGTTGCTGTGAAGATGCTGAATAGTTCCCAAGGAAATGGGGAAGAGTTCGTTAATGAAGTAGCTACAATGGGTAGAATCCACCATGTTAACATAGCTCGCTTGGTCGGTTTCTGTGCCGATGGCTTTAGAAGAGCTCTTGTTTACGAGTTCTTACCAAATGGTTCACTGCAGAAGTTCATAAATTCACCGGCCAACAGGCAAGACTTCCTTGGTTGGAAAAGGATGCAGGACATTGCTTTAGGCATAGCCAAAGGAATTGAATATCTTCACCAAGGTTGTGATCAACGCATTCTCCATTTTGACATTAAGCCTCAAAATGTTTTACTAGACCACGACTTTACTCCAAAAATATGTGACTTTGGTCTAGCCAAATTGTGTTCAAGGGATCAGAGCATAGTATCAATGACCACAGCTAGAGGTACTTTGGGGTACATTGCTCCTGAAGTTTTCTCACGAAACTTTGGAAACGTGTCATGCAAGGCAGATGTTTATAGCTATGGAATGATGCTGCTTGAAACAATAGGAGGGAGGAAGATCACTAAGGACTTAGAGGAAAACACTAGCCATGTTTACTACCCAGAATGGATTCACAATCTTTTAGAAGAACGTGAGGAAAGGAGAATTCACATAGATGATGAAGGGGATGCAGAAATTGCAAGGAAACTAGCAACTGTTGGACTTCGGTGCATCCAGTGGCATGCTATGGATAGACCATCCATGCAAGTGGTTGTTCAAATGTTAGAGGGAGACACAGACAGAACCCCAATACCTCCTAATCCTTTTGCGTCTACAGGATCAAGGAGTAAAAGTACAAATGTGGGTGTGGCTGCTAGACAACTAACTCAAGACTTAGAAGTTATCCACGAATTAGATTGA 1851 0.409 MDTCLVIASSSVVGLLLMVCFNVELAFGISMINKCLDLSCGNQVIRFPFRIKGRHPQQCGYPGFDLSCSTSNETVIELHKSVMLRVNSIDYKHQTIALSDPYGCLSKHLPNLNLSGSHFQFKPDYYADSSYNFFNCSKPTNRDLNYYLVPCLTTSTSQAYAIPSREMIQDLPLSFCTKMFNISFFPFNSLKDNVLLLMWSAPNCKHCESKGNTCGWKWNNYTAKHEIFCFSNPRGSSTALLTTGSVLGSFFLVLLTGGVYHIYDSYKLQKEKQAIIEKFLEDYKALKPTRYSYLEIKRITHNFKDKLGEGAFGIVFKGSISEEIIVAVKMLNSSQGNGEEFVNEVATMGRIHHVNIARLVGFCADGFRRALVYEFLPNGSLQKFINSPANRQDFLGWKRMQDIALGIAKGIEYLHQGCDQRILHFDIKPQNVLLDHDFTPKICDFGLAKLCSRDQSIVSMTTARGTLGYIAPEVFSRNFGNVSCKADVYSYGMMLLETIGGRKITKDLEENTSHVYYPEWIHNLLEEREERRIHIDDEGDAEIARKLATVGLRCIQWHAMDRPSMQVVVQMLEGDTDRTPIPPNPFASTGSRSKSTNVGVAARQLTQDLEVIHELD* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0686 616 Gene3D Transferase(Phosphotransferase) domain 1 376 579 - -
Apr1g0686 616 Gene3D Phosphorylase Kinase; domain 1 275 375 - -
Apr1g0686 616 ProSiteProfiles Protein kinase domain profile. 301 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g0686 616 SUPERFAMILY Protein kinase-like (PK-like) 285 573 IPR011009 -
Apr1g0686 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 422 434 IPR008271 GO:0004672|GO:0006468
Apr1g0686 616 PANTHER RUST RESISTANCE KINASE LR10-RELATED 34 615 IPR045874 GO:0004672
Apr1g0686 616 ProSitePatterns Protein kinases ATP-binding region signature. 307 329 IPR017441 GO:0005524
Apr1g0686 616 Pfam Protein kinase domain 303 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g0686 616 Pfam Wall-associated receptor kinase galacturonan-binding 35 100 IPR025287 GO:0030247
Apr1g0686 616 PANTHER RECEPTOR-LIKE KINASE 34 615 - -
Apr1g0686 616 SMART serkin_6 301 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0686 Apr-Chr1 8205418 8209057 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0686 38 585 Receptor kinase-like Gene Family AT1G66910 37.213 2.27e-110 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Apr1g0686 Pkinase 2.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0686 - - lang:109328752 832.402