LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr1g0677	ATGGCACTTTGTAGAACTGGGCCTAACCCATTACCGGGGAGTAAAAGCTTAGTTAATTCAGCTCAAAATTTGTTGACAATACTTATTGTCCCTGTTCCCCTGCATTTTACTGGACAATTTTATAATTTAGGCAAGAGAAAGCACAAAGGAGTATGCTGCTCATCATTAAAGAGTGCTGCATCTGCATCTTCTATGGAGCCGCAGGAAGATGTTCCAAGTACTCTTTCGGTTTGCTTGGAGGAGGAACTAGATCATGTTATACGGTTCAAAATGTCAGACTTCAAGATTTTAGGCTGTGTTAGCATTGGCCTTGGTGGGCGGTCGGATGAGGTAGTATATGAAGGCATGGTGAAGGATAGTGGTAGCCCTTTGTATAACACGAGAGTTGTACTTCGACAGCTTTCTAGTGCCCAAGCTCAGCGTCGAGGGAAACGAGCAATAGAGGTATTGAAGAAGCTGGTTCGGCGTAAACTTTTGTATCATTCTTACTCCATGCAAGTTCATGGTTATATCTCTTTGCCTGCAAGTGGCGGTGATGGTTCATTTATTCTAGTTCATGGGTATCATGGTAGTTTTTCTTTGAGACACTGGCTTCAACGGTCAGATTGGCTTCCAACGCTGGAGGCTACTCTTGCACTGGATGAAGAGTCTGTTAGGAAGGTAGGAGAAGACTCAACTGGAGGTCCTGCAGTTACTAGACAGTTGCGACTTATTCGAATATTGATGAGGGATCTTTTAATTGGGGTAAATTATCTGCACAGCCATGGTCTTGCCCATACAGAGTTGAGGCTGGAAAATGTGCATATAAGCCCAATAGACAGACATATCAAAGTAGGTATACTGGGTAATGCTGCTGACTTTTACAAGGAAGGTTCAAACACTGGATCAATGGACAACATGGACAGGCGACAGATGATGATTGCATTTGACATGAGATGTGTGGGCTTCATAATGGCCAAAATGGTGATGCGGGAACTTATGGACCCTTTGATCTTTGCAAAGTTCAAATCATTCCTCACAAAGGGGTATGATCCGTCATGTTTGCGAGAGCTTATGTTGGAAATCCTTGGTAGAAGTTCCCCATATGGAAATGCTGGACTACAAATACTTGATAGAAACTGGGGTGCTGGTTGGCACCTTTTATCATTATTGCTTGCCAACAAACCTTCTCAAAGGATAAGTTGTTTGGATGCTCTTAGACACCCATTCCTTTGTGGGCCAAGATGGCGAGTAGTGCCATCAATGGACATTATTAGATGGGGTCTGGGTTCTACTGCAATGCGTATCAGTGAGGAGTACATTTATCGGCAGCCTCAGCGTAGCAGGCTCGCCCACTTCATCGACTTAATGGAGATGTTGAATCCTCATCCAAAGCCAAAGAACTGGCTGGAGCTGCTTCCAGGCAAATGGCGTCTATTATATAGTACTGGGAAGCATGTGGGGCTGACCCTTCGGCAACCTCCTGTCCGAGTACTCATTGGAGATGTGCATTTAACCGTGACAAGAGTGTCAAAGTTGAAATCCAATCTTTCATTCCTCTCTGACATTGGATTCTCTGTCATGGTTGGTCAGGACTGGCCTCATGACAAAGCTGGAAAGAGTGGAAGATTGCAGGTGAATTCTTCATTTGCATTAACAGCTGGAAGACGGTTATATCTGAAGCACGACAAGACCACAGAGAAGTTTTTCTTTAGCCCTTCCAGCAATGTGGAGGCTTTAGCTCAGAAATTTACTGGCAAGAAATGGAGAAAAATAATCCCTTTCAAGGAGTTTCCGTCAAGTCTTCCTGCAGCAAAGCTTGCATCAAGTGAAATTGATGTGACAATGAATCTTGATGATCCATTAAATCGAAACATTGATACTGCAAAAATTGTTCTGCAAGAACTAAGAACACAAATCCCCCCAGAAATATTTGATTTGTCAAAGCTTGTGTGTGGAACTTATGTGGACTCGAGGCTTCTTGTCTTGCGAGGGGTTAATGGATCAGCGCTACTGTTTACAAGGTCTTTTGTGGATGGAAGTGGTTCTAGTTAA	2034	0.4356	MALCRTGPNPLPGSKSLVNSAQNLLTILIVPVPLHFTGQFYNLGKRKHKGVCCSSLKSAASASSMEPQEDVPSTLSVCLEEELDHVIRFKMSDFKILGCVSIGLGGRSDEVVYEGMVKDSGSPLYNTRVVLRQLSSAQAQRRGKRAIEVLKKLVRRKLLYHSYSMQVHGYISLPASGGDGSFILVHGYHGSFSLRHWLQRSDWLPTLEATLALDEESVRKVGEDSTGGPAVTRQLRLIRILMRDLLIGVNYLHSHGLAHTELRLENVHISPIDRHIKVGILGNAADFYKEGSNTGSMDNMDRRQMMIAFDMRCVGFIMAKMVMRELMDPLIFAKFKSFLTKGYDPSCLRELMLEILGRSSPYGNAGLQILDRNWGAGWHLLSLLLANKPSQRISCLDALRHPFLCGPRWRVVPSMDIIRWGLGSTAMRISEEYIYRQPQRSRLAHFIDLMEMLNPHPKPKNWLELLPGKWRLLYSTGKHVGLTLRQPPVRVLIGDVHLTVTRVSKLKSNLSFLSDIGFSVMVGQDWPHDKAGKSGRLQVNSSFALTAGRRLYLKHDKTTEKFFFSPSSNVEALAQKFTGKKWRKIIPFKEFPSSLPAAKLASSEIDVTMNLDDPLNRNIDTAKIVLQELRTQIPPEIFDLSKLVCGTYVDSRLLVLRGVNGSALLFTRSFVDGSGSS*	678

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr1g0677	677	SUPERFAMILY	Protein kinase-like (PK-like)	87	416	IPR011009	-
	Apr1g0677	677	Pfam	PAP_fibrillin	439	625	IPR006843	-
	Apr1g0677	677	Gene3D	Transferase(Phosphotransferase) domain 1	230	406	-	-
	Apr1g0677	677	SMART	serkin_6	94	404	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Apr1g0677	677	PANTHER	PLASTID-LIPID-ASSOCIATED PROTEIN 14, CHLOROPLASTIC-RELATED	69	670	-	-
	Apr1g0677	677	PANTHER	CELL DIVISION PROTEIN KINASE	69	670	-	-
	Apr1g0677	677	ProSiteProfiles	Protein kinase domain profile.	94	404	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	Group-Pl-4	Apr1g0677		PAP_fibrillin	5.2e-07	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr1g0677	-		-	ccaj:109796635	1178.7