Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0675 ATGTATGCAGAGACTGGTATTCTCTTCCCATATTTGCACAACCTCTCTCAAGAGCTTCATCAACTTGAGGAGTACTGCAAAACCCACAAGTCAAATGCTTCAATGGGTGACCTTGTTCAGTCTTCTGCCATGTCAGAGTATGATTTGGCAGCAGAGGGAGATCTGTTCAAAGCCCCTGAACCTATTATTGAAGAGCCAGTCATGGATCTGGATCCCATGACAGCAGCCATTTCAATGATATCTTGCGGGGAAGATGTCTCATCGCAGGGACTAAAGTCCACGGATATTGATATCCTTCAAAATGAACAGCTTCTGAGTGATATTTTCTATGAATGCAAAAAGGATCTCTTAGAAAAGGCAGCAATAGAGTCACCATTCTCTGATATTTTAGATATCAAGGTTCCTCCTATTCTGAACATTGATGAGAACTCTTTTCAAGAAAACAAGCCACTTGACATGCAATTACCAAAGAGTGTCAGTTCAGGAAGTTTGAGCTCAATGGACTGGATGCATGGAATGAAGCCTGCTTTTGTTGATATCCCTGTAATAGATTTCAATGCAGTTTATGGCATGCGAAGATCATTTAGTGAAGGAGATATAAAGACTCTGGGTAATGGTAATATGAACATTGTCCAATCACCCCTTGAGAGGCCCTTTCATATAAGCAACTGCACCAGTGAGGAACGCCGACAAAAGCTCTCCAGGTACAGGAATAAGAAGACAAAGAGAAATTTTGGGAGGAAAATCAAGTATGCCTGCAGGAAGGCTCTTGCTGACAGTCAACCAAGAATCCGCGGTCGATTTGCAAAGACTGAAGAATCTGATATCAAGAGGGAATGA 840 0.4202 MYAETGILFPYLHNLSQELHQLEEYCKTHKSNASMGDLVQSSAMSEYDLAAEGDLFKAPEPIIEEPVMDLDPMTAAISMISCGEDVSSQGLKSTDIDILQNEQLLSDIFYECKKDLLEKAAIESPFSDILDIKVPPILNIDENSFQENKPLDMQLPKSVSSGSLSSMDWMHGMKPAFVDIPVIDFNAVYGMRRSFSEGDIKTLGNGNMNIVQSPLERPFHISNCTSEERRQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEESDIKRE* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0675 279 PANTHER CCT MOTIF FAMILY PROTEIN 26 277 - -
Apr1g0675 279 Coils Coil 12 32 - -
Apr1g0675 279 ProSiteProfiles CCT domain profile. 229 271 IPR010402 GO:0005515
Apr1g0675 279 Pfam CCT motif 229 271 IPR010402 GO:0005515
Apr1g0675 279 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 26 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0675 Apr-Chr1 8070374 8076033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0675 212 274 C2C2-CO-like Transcription Factor Family AT3G21880 46.032 2.51e-10 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Apr1g0675 CCT 1.3e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0675 - - gmx:100814332 474.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0675 1 8070374 8076033 Apr1g0675 1 8070374 8076033 ECH