Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0662 ATGGGGAAGAAAGGAGGTAGCTGGTTTTCCTCTGTGAAGAAAGTTTTCAAGTCATCTTCTAAGGACTCGCCGGTAACGGAGAAGAAGAAAGAGAACAACGAAGAGCAATGGCAACATGAAGCGCCTGAGGTTGTGTCTGTTGAGCATTTTCCTGCTGAGAGTTCTCCAGATGTGACCAATGAGGAGAGTGACACGTCAACACCAGTGACTGAAGGTAGAAACCATGCCATTGCCTTTGCAGCAGCAACTGCTGCAGCTGCTGAAGCTGCGGTTGCTGCTGCTCAAGCAGCTGCTAGAGTTGTGAGATTGGCTGGTTATGGACGACACTCCAAGGAAGAAAGAGCAGCAACACTCATTCAATCATACTACAGAGGCTACCTTGCTCGGCGTGCACTGCGTGCTTTGAAGGGTCTAGTGAGGCTACAAGCACTTGTGAGGGGACACAACGTGCGCAAGCAAGCACAGATGACAATGCGATGCATGCAAGCATTAGTGCGAGTACAGGGAAGAGTAAGAGCTCGCAGACTCCAGTTAACACACGAGAAACATCAGAGGAAAGTGGAGCAAGAGCAAAGAGAATTTGAGGAACAAGATCCTAAGTTTATGAGCCCCATTGCAATGTTAGACACAGATGGTTGGGACAATAGGCGACAAAGTAGCCAACAAATTAAGGAAAATAGTTTAAGGAAACATGAAGCTGCAATGATGAGGGAAAGAGCACTTGCATATGCCTTTAATTGCCAGCAACAGCAGAGGCAATACATGCAGATAGAGCCAAATGGTGATGATATTGGAAGCTATGCCATTGAGCGTGAAAGGGCCCAATGGGATTGGAACTGGTTGGAACGTTGGATGTCATCACAATCACAGCATGTTAAGCACTTGGGTCCACGTGAGACCCTTTATAGGACTCTTGCCGCTACTACAACCACTGCTACTACTGCCACTGATGACATGTCTGAGGAAAAAACAGTGGAAATGGACATGGCAACAACACTGGACTCAACTCATGTTAACATGGGCCTTGGCAATCATGACTCTCTAGAATCAAGCCCCATATCATATAGGCTCCACCAACGACACCACAGTGCAGGTGTGCCTAGCTATATGGCCCCAACCCAGTCTGCAAAGGCTAAGGCTCGGAGTCAGGCTCAGTTTAAGCAACGGGCTTCATCTGGGCCTAACTGGAACTCATCCACGAGGAGAAGTTATGCTCTTGGGTTGGGCTGTGACTCACCAAGCTCTGGTGTGGCCACTGCAGTTCATATGTTTCCAAGGAGCCCAGGCCCGAAAATTAATGGGATTCGCCTTCAATCTAGACGGATTTCAGGTGGCAGCCCAGATAATGTTGGCGTGGAGGATTGGGCCCTTCCCCTCGGAGCCCACGGTTGGGCTTGA 1398 0.49 MGKKGGSWFSSVKKVFKSSSKDSPVTEKKKENNEEQWQHEAPEVVSVEHFPAESSPDVTNEESDTSTPVTEGRNHAIAFAAATAAAAEAAVAAAQAAARVVRLAGYGRHSKEERAATLIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQGRVRARRLQLTHEKHQRKVEQEQREFEEQDPKFMSPIAMLDTDGWDNRRQSSQQIKENSLRKHEAAMMRERALAYAFNCQQQQRQYMQIEPNGDDIGSYAIERERAQWDWNWLERWMSSQSQHVKHLGPRETLYRTLAATTTTATTATDDMSEEKTVEMDMATTLDSTHVNMGLGNHDSLESSPISYRLHQRHHSAGVPSYMAPTQSAKAKARSQAQFKQRASSGPNWNSSTRRSYALGLGCDSPSSGVATAVHMFPRSPGPKINGIRLQSRRISGGSPDNVGVEDWALPLGAHGWA* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0662 465 PANTHER IQ-DOMAIN 21 1 437 - -
Apr1g0662 465 ProSiteProfiles IQ motif profile. 112 140 IPR000048 GO:0005515
Apr1g0662 465 MobiDBLite consensus disorder prediction 20 42 - -
Apr1g0662 465 Pfam IQ calmodulin-binding motif 113 133 IPR000048 GO:0005515
Apr1g0662 465 Pfam IQ calmodulin-binding motif 139 154 IPR000048 GO:0005515
Apr1g0662 465 ProSiteProfiles IQ motif profile. 136 163 IPR000048 GO:0005515
Apr1g0662 465 PANTHER IQ-DOMAIN 5-RELATED 1 437 - -
Apr1g0662 465 Pfam Protein of unknown function (DUF4005) 348 404 IPR025064 -
Apr1g0662 465 Gene3D - 109 165 - -
Apr1g0662 465 Coils Coil 173 193 - -
Apr1g0662 465 MobiDBLite consensus disorder prediction 15 69 - -
Apr1g0662 465 SMART iq_5 134 155 IPR000048 GO:0005515
Apr1g0662 465 SMART iq_5 111 133 IPR000048 GO:0005515
Apr1g0662 465 MobiDBLite consensus disorder prediction 378 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0662 Apr-Chr1 7902553 7906443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0662 1 455 IQD Protein Family AT3G49260 48.739 7.86e-98 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0662 - - aprc:113873497 825.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0662 1 7902553 7906443 Apr1g0662 1 7902553 7906443 ECH