Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0633 ATGGCGGCTTTTACATCAATTGCTCTACAGTACTCATGTACAACATCTTTACAATCTTGGGTACCTTCTCTAGAAGCTACACATTATAATAATTCAAGGTGGGGGAGAGTGAGATCATGCAAATCCACAGGAAAAACATCACACCAACTGAAAATGGCAAGAGGTTTAACTATCCAGAGTGCAGCCACAAAACAAGCAAAGTCGCCAGCTGAAGAAGACTGGAAAGTTAAGCGAGAACTTCTGCTGGAAAAAAGGGTAAGAAGCGTGGATGCGAAGGAAGCTCTGCGCCTTCAGAAAGAAAATAATTTTGTGATTCTGGACGTAAGGCCAGAAGCAGAGTTCAAAGAGGCTCATCCTCCAGATGCTATCAATGTGCAAATATATAGGCTTATAAAAGAGTGGACGGCATGGGACATTGCTAGACGTGCTGCATTTGCGTTTTTTGGTATTTTTGCCGGTACTGAAGAGAACCCAGAGTTCATGCAGACTGTTGAGGCGAAATTAGATAAAAATGCAAAGATAATCGTAGCTTGCTCCGCAGGGGGCACAATGAAACCATCACAAAATCTGCCCGAAGGTCAACAATCAAGGTCTCTCATAGCAGCTTACGTGCTGGTCCTTAACGGGTATAACAATGTCTTCCATCTAGAAGGTGGTCTTTACACATGGTTTAAAGAGGGTCTGCCAAGCGTTTCAGAGGAGTGA 705 0.4355 MAAFTSIALQYSCTTSLQSWVPSLEATHYNNSRWGRVRSCKSTGKTSHQLKMARGLTIQSAATKQAKSPAEEDWKVKRELLLEKRVRSVDAKEALRLQKENNFVILDVRPEAEFKEAHPPDAINVQIYRLIKEWTAWDIARRAAFAFFGIFAGTEENPEFMQTVEAKLDKNAKIIVACSAGGTMKPSQNLPEGQQSRSLIAAYVLVLNGYNNVFHLEGGLYTWFKEGLPSVSEE* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0633 234 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC-RELATED 26 234 IPR043186 -
Apr1g0633 234 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC 26 234 - -
Apr1g0633 234 CDD RHOD 93 223 - -
Apr1g0633 234 Pfam Rhodanese-like domain 91 224 IPR001763 -
Apr1g0633 234 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 84 231 IPR036873 -
Apr1g0633 234 ProSiteProfiles Rhodanese domain profile. 99 232 IPR001763 -
Apr1g0633 234 Gene3D - 84 233 IPR036873 -
Apr1g0633 234 SMART rhod_4 89 229 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0633 Apr-Chr1 7621419 7625543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0633 1 229 Sulfurtransferasese or Rhodanese AT4G27700 66.522 1.39e-106 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0633 - - gmx:100788147 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0633 1 7621419 7625543 Apr1g0633 1 7621419 7625543 ECH