Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0632 ATGTCAAAAATGATTTGGCCATGGGTTACCTCCATCTCTTCCCTTCTCTTCATAATTCTATTCTCATATCTAACCATTCGCTTCTTCCGCAAAACCTCTGCACTTCACATACTCAACCAATGGTTCCTCTCACTTGAAAACCGTCTCCACCTTCATCAATCCTTCAAAATCCCACTCTACAATCACCATTTCCAAGAAAACCAACTGTACCACAAAATCCTCACCTACCTCGACTCTCTCCCCTCCGTCCAAGACTCCGATTTCACCAACCTCTTCTCCGGCCCCAATCCCTCCGATATCTTCCTCCATCTCGACCCTAACCACACCGTCCACGACACCTTCCTCGGCGCCAAGCTCTCATGGACCAACGACGCCACCGCCGCCACCCTCCTCCTCAAAATCAAGAAGAAAGACAAGCGAAGGATTTTCCGCCAATACTTCCAGCACATTCTCTCCGTCGCCGACGAGATCGAACAGCGCCGGAAGAAGGACATCAAGCTGCACGTCAATTCCGGCGCCGGCGAGACCTCGCGGTGGCGATCGGTTCCGTTCACGCATCCGGCGAGCTTCGAGACGGTGGCGATGGAGGCAGAGTTGAAGAACAAGGTGAAATCCGATCTGGACCAGTTCCTCAAGTCGAAGCAGTACTACAACCGGTTAGGGCGCGTTTGGAAGCGGAGTTACCTCCTCTACGGCTCGTCCGGCACGGGGAAATCAAGCTTCGTGGCGGCCATGGCGAAATTCCTCTGCTACGACGTCTACGACGTCGACGTTTCGAAGCTCACGGACGGCTCCGATTGGAAGACGATGCTGATGCAAACGACGGCGAAGTCGATGATCGTGATCGAGGATCTCGATCGCTTGCTGGCGGGGAAATCAACGGCGGTGAATTTATCGAGCGTGTTGAACTTCATGGACGGTATCGTGTCGTGCTGCGGCGAAGAGCGCGTGATGGTGTTCACGATGAACGGTACTAAGGACGACATTGATCAAGCGGTTTTGAGGCCAGGGAGGGTTGATGTTCACATACACTTTCCCTTGTGTGATTTCTCCACCTTCAAGATTCTCGCGAGTAGTTACTTAGGGTTGAAGGAGCACAAGCTTTTCCCTCAGGTCGAAGAGGTTTTTCAGACCGGCGCGCGGCTCAGCCCAGCCGAAGTTGGCGAGATCATGATATCCAACCGCAATTCGCCGAGCCGGGCCTTGAAAACCGTTATTTCGGCTTTGCAGGTTCAATCCAACGGTGGAGATGCGAGGAGAGGGGGACAGAAGTTGAGCGAAAGCGGGTCGGGTCGGAGCAGTGATGATAACGAATCGGGTGCTGTAATATGTAGGGAGAGTGTTCACACGGTGAGGGAGTTCCGCAAGTTGTATGGGCTTTTGCGTTTGGGAAGTAGGAGGAAGGAAGAGTCCGAAAATTCTGGGCCCATAGAGAAAGAAGCTCCACGTATTGAGGGTCGGGTCTGA 1467 0.5317 MSKMIWPWVTSISSLLFIILFSYLTIRFFRKTSALHILNQWFLSLENRLHLHQSFKIPLYNHHFQENQLYHKILTYLDSLPSVQDSDFTNLFSGPNPSDIFLHLDPNHTVHDTFLGAKLSWTNDATAATLLLKIKKKDKRRIFRQYFQHILSVADEIEQRRKKDIKLHVNSGAGETSRWRSVPFTHPASFETVAMEAELKNKVKSDLDQFLKSKQYYNRLGRVWKRSYLLYGSSGTGKSSFVAAMAKFLCYDVYDVDVSKLTDGSDWKTMLMQTTAKSMIVIEDLDRLLAGKSTAVNLSSVLNFMDGIVSCCGEERVMVFTMNGTKDDIDQAVLRPGRVDVHIHFPLCDFSTFKILASSYLGLKEHKLFPQVEEVFQTGARLSPAEVGEIMISNRNSPSRALKTVISALQVQSNGGDARRGGQKLSESGSGRSSDDNESGAVICRESVHTVREFRKLYGLLRLGSRRKEESENSGPIEKEAPRIEGRV* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0632 488 Pfam Domain associated at C-terminal with AAA 36 122 IPR025753 -
Apr1g0632 488 CDD AAA 225 347 - -
Apr1g0632 488 SMART AAA_5 224 349 IPR003593 -
Apr1g0632 488 PANTHER BCS1 AAA-TYPE ATPASE 17 427 - -
Apr1g0632 488 PANTHER BNAANNG18710D PROTEIN 17 427 - -
Apr1g0632 488 MobiDBLite consensus disorder prediction 413 441 - -
Apr1g0632 488 Pfam ATPase family associated with various cellular activities (AAA) 229 347 IPR003959 GO:0005524|GO:0016887
Apr1g0632 488 Gene3D - 179 344 IPR027417 -
Apr1g0632 488 Gene3D - 345 409 - -
Apr1g0632 488 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 408 IPR027417 -
Apr1g0632 488 MobiDBLite consensus disorder prediction 467 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0632 Apr-Chr1 7607314 7608977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0632 109 340 Calmodulin-binding Proteins AT3G56690 25.000 1.49e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0632 - K08900 gmx:100797983 786.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0632 1 7607314 7608977 Apr1g0632 1 7607314 7608977 ECH