Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0631 ATGTTGCAAGACATGTTGCTGTACGCGGCGAGCGCGGCGCTGAGTTGCTTGGTATTGTTTGCGGGGCTCCGACACTTCGACCCGAGCCGCGAATCATCGAAGAAGGCTCTTGAGCTCAAGAAAGAGATTGCCAAGCGTCTCGGTCGCCCCCTTATTCAGACTAACCCTTATGAGGATGTTATAGCCTGTGATGTTATAAATCCTGACCACATTGATGTGGAGTTCAATTCTATTGGGGGACTCGAAGCAATCAAGCAAGCTTTGTTTGAGCTTGTTATTTTGCCTCTAAAAAGACCTAACTTGTTTTCATATGGTAAGCTTCTTGGGCCACAGAAGGGAGTCCTGTTGTATGGACCACCTGGTACCGGGAAAACCATGCTTGCCAAAGCTATTGCTAAGGAGTCAGGAGCAGTTTTTATTAATGTGAGGATATCAAACCTGATGAGCAAGTGGTTTGGGGATGCCCAAAAGCTTGTGGCTGCTGTATTTAGCTTGGCTCATAAGCTCCAGCCCGCCATCATATTCATTGATGAAGTAGACAGTTTTTTGGGTCAGCGTCGTACAACAGATCACGAGGCTTTGTTAAACATGAAAACTGAGTTCATGGCTCTGTGGGATGGATTTACCACAGATCAGAATGCTCGAGTTATGGTCCTTGCAGCAACTAATCGTCCTTCAGAACTTGATGAAGCAATACTTCGACGACTTCCTCAAGCCTTTGAAATTGGAATTCCTGATCAAAGGGAGAGGGCTGAAATATTGAAGGTTATCCTAAAGGGTGAGAGGGTTGAAGACAACATAGACCTTGGTCGTATAGCTGGGTTATGTGAGGGTTACACTGGTTCAGATCTATTTGATCTTTGCAAGAAGGCTGCCTATTTTCCTATTAGAGAACTACTGGCTGAAGAGAAGGAAGGGAAACGATCACCTGCACCTAGACCTTTGTCGCAGTTAGACTTGGAGAGGGCCCTTGCCACTTCACAGAAGACAAAGGTTGCTGCAAGTGAATACGGTGGATTAAGCTTTCAGTTACCTTCAAGATGGACAGTGCATGGTGAATCAGAGTAA 1068 0.4579 MLQDMLLYAASAALSCLVLFAGLRHFDPSRESSKKALELKKEIAKRLGRPLIQTNPYEDVIACDVINPDHIDVEFNSIGGLEAIKQALFELVILPLKRPNLFSYGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAHKLQPAIIFIDEVDSFLGQRRTTDHEALLNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILRRLPQAFEIGIPDQRERAEILKVILKGERVEDNIDLGRIAGLCEGYTGSDLFDLCKKAAYFPIRELLAEEKEGKRSPAPRPLSQLDLERALATSQKTKVAASEYGGLSFQLPSRWTVHGESE* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0631 355 CDD AAA 108 243 - -
Apr1g0631 355 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-LIKE 1 333 - -
Apr1g0631 355 Gene3D - 245 325 - -
Apr1g0631 355 ProSitePatterns AAA-protein family signature. 216 235 IPR003960 GO:0005524|GO:0016887
Apr1g0631 355 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 333 - -
Apr1g0631 355 SMART AAA_5 110 246 IPR003593 -
Apr1g0631 355 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 73 301 IPR027417 -
Apr1g0631 355 Pfam ATPase family associated with various cellular activities (AAA) 114 243 IPR003959 GO:0005524|GO:0016887
Apr1g0631 355 Gene3D - 72 329 IPR027417 -
Apr1g0631 355 Pfam AAA+ lid domain 266 300 IPR041569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0631 Apr-Chr1 7598130 7603385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0631 69 310 Calmodulin-binding Proteins AT3G56690 34.286 3.36e-37 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0631 K22530 - gmx:100796908 632.484