Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0621 ATGGGGATTCTTGGTGACCATCATCATAATCATAACCATAATAAGCACCACATGAGCTTTCATCTGCACATACCTCACCTCCACTTTCATCACCACCATGAGAAGAAGGATCCGAAGGACATCCCAAAAGGGTGTTTAGCAATCTTGGTTGGCCAAGGAGAGGAGCAACAAAGGTTTGTGATCCCTGTGATCTACATCAACCACCCACTGTTCTTGCAGTTGTTGAAAGAAGCTGAAGAGGAATACGGGTTTGATCAGAAAGGCCCCATTACCATTCCCTGCCACGTGGAACAGTTCCGTACCGTCCAAGGCATCATTGACAGGGAGAAGTGTTTCCATCATCACCATGCTTGGTGCTTTAAAGTTTGA 369 0.4607 MGILGDHHHNHNHNKHHMSFHLHIPHLHFHHHHEKKDPKDIPKGCLAILVGQGEEQQRFVIPVIYINHPLFLQLLKEAEEEYGFDQKGPITIPCHVEQFRTVQGIIDREKCFHHHHAWCFKV* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0621 122 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 17 117 - -
Apr1g0621 122 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 17 117 IPR003676 GO:0009733
Apr1g0621 122 Pfam Auxin responsive protein 33 102 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0621 Apr-Chr1 7503689 7504301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0621 38 100 Calmodulin-binding Proteins AT5G20810 57.143 4.70e-19 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0621 K14488 - gmx:100526867 174.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0621 1 7503689 7504301 Apr1g0621 1 7503689 7504301 ECH