Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0616 ATGGGTGAATTTGGCGTTTCACACAAGGAAGATGTTAAAAAAAGTAGCAGCAACAACAACGCTAGTGGGAGTAGTGTTCTTGGGTTGGACGTGAAGGTGCAGGATTCTGAAGCATTGCCTAATAAGATGATGATGATGATGGTGCATCATAATCATCACCACCGTCCATTGTCACCCTTTGATAATGATTCCTGTGCTGGTGATGGCGATGGTCCCACGACTTACATGTCTTTTACTAATCATATAAACCTTGTTAGTGATGCTTCTGTTCTTGGTCCTGCTATTGATGGTGGCTGTGGTGCTGCTGCAGCACCTGTAAGACCTTTGCAGCCTTTTCACACTTCTGCTAACACTTCTGCTACCTCCACCTTCAAATCCTCAGGTGGGATGGCGGCTTCGTTGGGGTTTCCTTTCACAAGTGCACAATGGAAGGAGCTTGAAAGACAAGCTATGATATTCAAGTACATGATGGCTTCTGTTCCTGTTCCACCTGATCTACTCTTACCTTCTTCAGTCACAACCACTCCTCGCTATCCTTGCATGGATGGTGGTTTCAATCTGAGATTAGCAAGCAGCACTGACCCAGAGCCAGGTAGGTGCAGGAGAACAGATGGTAAAAAATGGAGATGTTCAAGGGATGTTGCCCCTAACCACAAGTATTGTGAGCGCCATATGCATAGAGGCCGTCCCCGTTCAAGAAAGCCTGTGGAAGTTCACACCAACACCATCACCAACACCCTCAGCAGCAACAACAATAACAACCTCCAAATCAAGAGGCCTCGCCATGATTGTAATCCTTTTCCTACAGCTGGTGTTACTGTGGCTATTTCGAACCCTTCAACAAGAAAAGATGCATCTTCATCCCATTATCTTGCGCCTCCTACCACTCAGCCGTACCTTGAATCTTCCCTCTCTCTTCATAACTTTGGTGTCAAAGCTGCAAACTTTGGCTCCGTGGCTTCTGTTTCTTCAAATGAGGAACCAAGGGGTTTGGACTGGATGTTGAATGGAGATCCCATTTCTCTAGGAGCCTCTGATTCAGAATGGCAGTCTTTGATGCATAACAAAGTTGGAATGAGCAGTGAGAGTTCCTGTCATAACACCCACCCTCAGTATTTGAATTCATTTGCGCTGTATAGTTCTGGACTGGATCAACAGAACAGAAGCCTCCCTTTGTTCCTTAACCCTCTAGTTGTTCCCATGGAAAGTTTCCAATCAGAGAAACCAAGGGGTTTCATTGATGCTTGGTCAAACACAGAAACAGGTGAAAGCAATGCCAACAGCAACAACAAGAACTGTGCTGCATCAATTGGTAAACTATCCCTCTCTTCTCTTGATCTATCAATGGGTGGTGGTACTGCTGTGCATGAAGACATGGGTACAATTGAAATGGGTTTAGGCCTAATGGAGCCTGATGCAAACGCACACAATGACACCAAAATCTCTCTCTCAAACTGGCTCAACCCAACAGCACCTTGGGTGGCTTCAACTTCAACACCTGGGGGTCCTCTAGCTGAAGTTCTAAGGCCAAGCACTGTCACTGCTACCAATGAGACCACCTCCAATCCGTCTTCACCAGTCATAACACATGTTGAATCTAACAGCCCTTTGGGAACAATGGTGTCATCTCCATCTGGGGTCTTGCAAAAGACACTTGCTTCATTGTCTGATAGTAGTAGCAATAGCAGCCCAACAATTGCATCATCAAGGGCCAATTCTGAAATGCCCTTGCTAAGGTTTCAATCAAATGTAAATTAA 1758 0.4556 MGEFGVSHKEDVKKSSSNNNASGSSVLGLDVKVQDSEALPNKMMMMMVHHNHHHRPLSPFDNDSCAGDGDGPTTYMSFTNHINLVSDASVLGPAIDGGCGAAAAPVRPLQPFHTSANTSATSTFKSSGGMAASLGFPFTSAQWKELERQAMIFKYMMASVPVPPDLLLPSSVTTTPRYPCMDGGFNLRLASSTDPEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKPVEVHTNTITNTLSSNNNNNLQIKRPRHDCNPFPTAGVTVAISNPSTRKDASSSHYLAPPTTQPYLESSLSLHNFGVKAANFGSVASVSSNEEPRGLDWMLNGDPISLGASDSEWQSLMHNKVGMSSESSCHNTHPQYLNSFALYSSGLDQQNRSLPLFLNPLVVPMESFQSEKPRGFIDAWSNTETGESNANSNNKNCAASIGKLSLSSLDLSMGGGTAVHEDMGTIEMGLGLMEPDANAHNDTKISLSNWLNPTAPWVASTSTPGGPLAEVLRPSTVTATNETTSNPSSPVITHVESNSPLGTMVSSPSGVLQKTLASLSDSSSNSSPTIASSRANSEMPLLRFQSNVN* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0616 585 MobiDBLite consensus disorder prediction 1 15 - -
Apr1g0616 585 MobiDBLite consensus disorder prediction 1 26 - -
Apr1g0616 585 ProSiteProfiles QLQ domain profile. 137 172 IPR014978 GO:0005524|GO:0005634|GO:0006355
Apr1g0616 585 PANTHER GROWTH-REGULATING FACTOR 7 100 572 - -
Apr1g0616 585 SMART QLQ_2 136 172 IPR014978 GO:0005524|GO:0005634|GO:0006355
Apr1g0616 585 Pfam QLQ 137 169 IPR014978 GO:0005524|GO:0005634|GO:0006355
Apr1g0616 585 MobiDBLite consensus disorder prediction 552 585 - -
Apr1g0616 585 Pfam WRC 195 237 IPR014977 -
Apr1g0616 585 ProSiteProfiles WRC domain profile. 194 238 IPR014977 -
Apr1g0616 585 PANTHER - 100 572 IPR031137 GO:0005634|GO:0006351|GO:0032502
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0616 Apr-Chr1 7434516 7437834 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0616 405 561 GRF Transcription Factor Family AT5G53660 38.272 1.68e-16 79.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Apr1g0616 WRC 6.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0616 - - gmx:100803096 789.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0616 1 7434516 7437834 Apr1g0616 1 7434516 7437834 ECH