Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0615 ATGTTCCCCATTCGACTTACTTTGCTCCTGTGTTTTCTATTTCATCATTTTCATAGCATCACATCTCACACAGACAAAGCTTCCCTTCTCTCTTTCAAATCCCAGGTCATTGACCCAAAAAATGTTCTATCAAACTGGTCTTCAGATTCCAATCACTGTACCTGGTTCGGTGTCACATGCTCCAAAGTTGGAAATAGGGTCCAATCTCTGACTCTACCAGGACTAGGCCTCTCTGGCAAAGTACCCTCTCAACTCTCCAACCTCACTTACCTACACTCACTTGACCTTTCAAACAACAGTTTTCATGGCCAAATTCCCTTCGAGTTAAGCCATCTCTCACTTCTTAATGTCCTTAAAATACCTTTAAACAATCTAAGTGGTACACTGCCACAACAATTGGGTCATCTCCACCGTCTTCAAAGTTTAGACTTGTCAGTCAATAATCTCACCGGAAAAATCCCTCCATCATTTGGCAATCTCTTCTCTCTTAAGGATCTTGCCTTGGCAAGAAACAGTTTTGTGGGTGAGATTCCAAGTGAACTTGGTAATCTTCACAATCTTTCTCAACTTCAACTCTCAGAAAACAACTTCACTGGCGAGTTTCCCACTTCTATCTTTAACATCTCGTCCTTAGTTTACTTATCCGTGACAAAGAACAATCTATCAGGCAAGTTGCCACAAAATTTTGGTCATGCACTTCCAAATTTACAGAATCTTTCTCTGGCAAACAATAGGTTTGAAGGAGTGATTCCTAGTTCCATATCCAACGCCTCACATCTTAAATACATTGACCTTGCTAAAAATTATTTTCACGGGTCAATACCTCTATTCAAAAACTTGAGAAACCTTACCCGCCTGATTCTTGGTGAAAATTTTTTTTCTTCTACCACCTCATTGAATTTCCAATTCTTTGATTCCCTTAGAAACTCCACCCAATTGCAAATTCTCATGATCCATAACAACTATCTGGCTGGGGAACTTCCAAGATCAGTTGCCAATCTCTCTAGCAATCTCCAACAATTTTGTGTTGCTAACAATTGGCTAAATGGTAGCATTCCTCAAGGACTGAAGAGGCTTCAAAATCTCATATCCTTGTCTTTTGAAAACAATAATTTCACTGGAGAGTTACCAGCAGAAATAGGAGCACTGCGTAAGCTGCAACGGCTATTGATATACAACAATAGTTTATCTGGTGAAATTCCTGACATTTTTGGCAATTTCACAAATTTGGATATACTTGCAATGGGAATCAACCAGTTCTCAGGTAGAATTCCCTCAAGTATTGGACAATGCAAGAGATTAACTTCTCTTTACCTGCAAATGAATAGGCTCGGTGGGACCCTACCGAAGGAAATTTTTCAGCTTTCTGGGTTAATAAGCTTGAACTTAGAAGGAAACTCTCTGCATGGTTCGGTTCCTCATGAAATCAGCACCATGACTCAGCTTCAGTTCATGTTTATTTCTGACAACCAGTTGTCAGGGAACATTCCTAGGGAAATAGAGGACTGTTCCAGCTTGAAGTTTCTTGAGATGGCAAGAAACAAATTCAATGGCTCAATCCCAACTAATATAGGGAATATACAGTCCCTTGATACTTTGGACCTATCATCGAACAGTCTCACTGGCCCTATTCCTCAAAGTTTAGAGAAGCTCAAGTATCTGCAGACACTGAATTTGTCTTTCAACCATTTGGAAGGAAAGGTTCCAGGTGTTTTTGTGAACATTACCAAGTTTGATCTTCGAGGTAACAACCAACTATGTAGCCTTAACAAGGAAATTGTGCACAAGTTTGGCGTACTCCTATGTTTTGTTGGTAGAAAGAAAAGAAAGATTTTACCCACTATCATACTTGCAGTAATTGGTGCTGTTGCTTTGTGCATTTCAATTCTCTTTCTATTTTGGATAATGATGTCTCAAAAGAAGAAGAGAAAAACCAGTTTGTCATCTGCACCTCTCAGAGGGTACCCTCAGAATATTTCCTATGGTGATATTCTGATTGCTACGAACAACTTTGCAGCTGAAAACTTGATTGGCAAAGGAGGCTTTGGATCAGTGTACAAGGGTTTGTTCAGCTTCAGCACTGGTGAAACCACTACCCTCGCTGTCAAAGTCCTGGACCTGCAACAAAGCAAAGCTTCTCAGAGTTTTAATGCTGAATGTGAAGCCTTGAAAAATATTAGGCACCGAAACCTAGTGAAAGTTATCACTTCTTGTTCCAGTGCTGATTACAAGGGAGAGGAATTTAAGGCCCTTGTTATGCAATTCATGCCCAATGGTAACTTGGACGTGAGTTTACACCCCAGAGATGATGAATCAGGATCTTCTCTAACCTTGTTGCAAAGATTGAACATTGCCATTGATGTGGCTTCTGCCATAGACTACTTGCACCATGACTGTGAACCCCCAGTAGTACATTGTGATCTGAAACCTGCCAATGTCCTACTAGATGAAAATATGGTTGCACATGTAGCAGACTTTGGATTGGCAAGGTTTCTTTCTCAAAATCCTTCCGAGAAACAAAGTAGCACTTTGGGACTGAAGGGATCAATAGGTTACATTGCCCCAGAATATGGTCTAGGAGGCAAGGCTTCAACCCATGGTGATGTATACAGTTTTGGTATCCTACTGTTAGAGTTGTTCATGGCCAAAAGACCAACTGATGAAACGTTCAAAGAAGGATTAAGCCTTAACAAATTTGTCTCAGCCGTGGATGAGAATCAAGTGCTTAAGGTTGCTGATAGAAGGCTTATTAATGATTATGAATATTCCACACAAAATTCGAGCATTGATTGTCACAGCGGTGACTTTGGTGGCAACCATTTTAATAATGGAAACATGAATTGGATGCGCAAAGCTGAGGAGTGCATAGTTGCTGTGATAAGGGTGGGCTTGTGTTGCACAGCACAACGGCCCAAAGATCGATGGAGCATGAGAGAGGCCTCAACAAAATTGCAGGGAATTAGGCGGTCTATGCTGGGCTTTTGA 2985 0.4077 MFPIRLTLLLCFLFHHFHSITSHTDKASLLSFKSQVIDPKNVLSNWSSDSNHCTWFGVTCSKVGNRVQSLTLPGLGLSGKVPSQLSNLTYLHSLDLSNNSFHGQIPFELSHLSLLNVLKIPLNNLSGTLPQQLGHLHRLQSLDLSVNNLTGKIPPSFGNLFSLKDLALARNSFVGEIPSELGNLHNLSQLQLSENNFTGEFPTSIFNISSLVYLSVTKNNLSGKLPQNFGHALPNLQNLSLANNRFEGVIPSSISNASHLKYIDLAKNYFHGSIPLFKNLRNLTRLILGENFFSSTTSLNFQFFDSLRNSTQLQILMIHNNYLAGELPRSVANLSSNLQQFCVANNWLNGSIPQGLKRLQNLISLSFENNNFTGELPAEIGALRKLQRLLIYNNSLSGEIPDIFGNFTNLDILAMGINQFSGRIPSSIGQCKRLTSLYLQMNRLGGTLPKEIFQLSGLISLNLEGNSLHGSVPHEISTMTQLQFMFISDNQLSGNIPREIEDCSSLKFLEMARNKFNGSIPTNIGNIQSLDTLDLSSNSLTGPIPQSLEKLKYLQTLNLSFNHLEGKVPGVFVNITKFDLRGNNQLCSLNKEIVHKFGVLLCFVGRKKRKILPTIILAVIGAVALCISILFLFWIMMSQKKKRKTSLSSAPLRGYPQNISYGDILIATNNFAAENLIGKGGFGSVYKGLFSFSTGETTTLAVKVLDLQQSKASQSFNAECEALKNIRHRNLVKVITSCSSADYKGEEFKALVMQFMPNGNLDVSLHPRDDESGSSLTLLQRLNIAIDVASAIDYLHHDCEPPVVHCDLKPANVLLDENMVAHVADFGLARFLSQNPSEKQSSTLGLKGSIGYIAPEYGLGGKASTHGDVYSFGILLLELFMAKRPTDETFKEGLSLNKFVSAVDENQVLKVADRRLINDYEYSTQNSSIDCHSGDFGGNHFNNGNMNWMRKAEECIVAVIRVGLCCTAQRPKDRWSMREASTKLQGIRRSMLGF* 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0615 994 SMART LRR_typ_2 233 256 IPR003591 -
Apr1g0615 994 SMART LRR_typ_2 88 112 IPR003591 -
Apr1g0615 994 SMART LRR_typ_2 184 208 IPR003591 -
Apr1g0615 994 SMART LRR_typ_2 431 455 IPR003591 -
Apr1g0615 994 SMART LRR_typ_2 551 574 IPR003591 -
Apr1g0615 994 SMART LRR_typ_2 136 159 IPR003591 -
Apr1g0615 994 SMART LRR_typ_2 479 503 IPR003591 -
Apr1g0615 994 SMART LRR_typ_2 280 306 IPR003591 -
Apr1g0615 994 SMART LRR_typ_2 359 383 IPR003591 -
Apr1g0615 994 Pfam Leucine Rich Repeat 138 160 IPR001611 GO:0005515
Apr1g0615 994 Gene3D Phosphorylase Kinase; domain 1 653 755 - -
Apr1g0615 994 PANTHER RECEPTOR-LIKE PROTEIN 55 160 984 - -
Apr1g0615 994 PANTHER RECEPTOR-LIKE PROTEIN 55 2 85 - -
Apr1g0615 994 PANTHER RECEPTOR-LIKE PROTEIN 55 77 163 - -
Apr1g0615 994 Gene3D Transferase(Phosphotransferase) domain 1 756 992 - -
Apr1g0615 994 Pfam Leucine rich repeat 433 492 IPR001611 GO:0005515
Apr1g0615 994 Pfam Leucine rich repeat 234 291 IPR001611 GO:0005515
Apr1g0615 994 Pfam Leucine rich repeat 529 583 IPR001611 GO:0005515
Apr1g0615 994 ProSitePatterns Protein kinases ATP-binding region signature. 677 703 IPR017441 GO:0005524
Apr1g0615 994 Pfam Protein tyrosine and serine/threonine kinase 674 904 IPR001245 GO:0004672|GO:0006468
Apr1g0615 994 Gene3D Ribonuclease Inhibitor 21 170 IPR032675 -
Apr1g0615 994 Gene3D Ribonuclease Inhibitor 277 593 IPR032675 -
Apr1g0615 994 CDD STKc_IRAK 677 987 - -
Apr1g0615 994 SUPERFAMILY Protein kinase-like (PK-like) 646 982 IPR011009 -
Apr1g0615 994 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 85 - -
Apr1g0615 994 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 77 163 - -
Apr1g0615 994 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 160 984 - -
Apr1g0615 994 SUPERFAMILY L domain-like 231 592 - -
Apr1g0615 994 ProSitePatterns Serine/Threonine protein kinases active-site signature. 803 815 IPR008271 GO:0004672|GO:0006468
Apr1g0615 994 SUPERFAMILY L domain-like 21 444 - -
Apr1g0615 994 SMART serkin_6 671 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g0615 994 Pfam Leucine rich repeat N-terminal domain 24 61 IPR013210 -
Apr1g0615 994 ProSiteProfiles Protein kinase domain profile. 671 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g0615 994 PRINTS Leucine-rich repeat signature 139 152 - -
Apr1g0615 994 PRINTS Leucine-rich repeat signature 527 540 - -
Apr1g0615 994 Gene3D Ribonuclease Inhibitor 171 276 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0615 Apr-Chr1 7429668 7432806 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0615 18 989 Receptor kinase-like Gene Family AT3G47570 40.493 0.0 706
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Apr1g0615 PK_Tyr_Ser-Thr 3.6e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0615 - - gmx:100776054 1515.36