Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0604 ATGTTGCTTCTTCATCTGTCCCCAAACCGTTCATCTCTCTGTTCTTCAATCACATTTCATCCATTCCCACTAAACCTTTCACACTCCTTTCAACTCTCCCTTCAACCTCAACCCTTCTTCTCCCTCACAACAAAACAACAATCAAACAACCACTTCTTCCGCCGCCGGTGCACTAACTCCGTCGCCACTCTCAATACCCAAATTGCGTCCTTCATTTCTCTCTTTCAACAAATCGGAATTGGCTTCGTGGAAACGCAAACGCTCTTCACCAATAACCCTGACCTCACCTCGCTGCCATTGGACTCATTGCGAACTCGCCTTCTATCTTTGCATTCTCTAGGGTTCGATCGTGTCACTCTCTACCAGTTAGTTACAAAGCGCCCAACCGTTCTAACAGATAAAGAAATCGACCCGTTGTTAACCTTTCTCAGAGACGAATTGCAAGGGGAAATTGAGAAAGAGCAACTGAATCGTCTTTTCTTTGCTACAGAACCAAGATTCTTGGTGGGTTTTCCTCAAAAGGTTCAATTGCTCATTGACCGTGGAGTTCCCGTTTACAAGGTTGTTCACGTGCTTAACAAAGTCAATTTGCAAAAGGCCTTGTGTTATAGGGCAGTTGATGAAATTGACAAAATCATAGCTTTCTTAGAACCCTTTAGTGGCATTAGTTTGATTCTCAAACGCCCTGCGGTTTTGAACTTCGATTTGGAAAGTCAACTTGTTCCCAGAGTCAACGTTTTGACAGAGCTTAGTGGTGGAGATGATGATAGTGTTGGGAAAGTGCTGCTTAGGTTCCCTGCATTTTTGAACTATAGTGTGGAACATGTGGAGGAACATGTAGAGTTTCTGAGGTCTTTTGTTGACCTTGGTGACCAAGAAATTTTTAGGATCATACTTGGATTCCCAGCTATTGTTACTGCTAGTAGGGAGAGGAAACTGCGTCCTAGGATACAGTTTCTCAAGGATTGTGGATTGGATTCGGGCGATATCTTCAAGTTCTTGATTAAAGCACCCTTGTTTCTAAGCCATTCGTTTTACGGGAACATTGTGCATAAGCTTGTGCTTTTGGTTAAGATTGGGTATAGATATAGGACAAGGGACTTGGCAATGGCAATGAGGTCTGCTACTAGGACAAACTGTGAGAACTTGCGAAAGGTCATTGGTTTGTTCTTGAGTTATGGGCTTACGTGTGAAGATATTGTTGCTATGGCCAAGAAGCATCCACAGATACTGCAGTATAATAATGCTTCTTTGGAGAAGAAGATGAAGTACTTGATAGAGGAGATGGAACGTGACATTGAGGAGTTACTGGTTTTTCCTGCATTCCTTGGTTACAAGTTTGATGACAGAATTAAGCATAGGTTTGAAGTAAAGAAGAGTACAAGAGGAGGAGGAATGTCTATCAATAAGCTTTTAACTGTTTCCAATGAGAGATTCACTGGCAAATGA 1449 0.4237 MLLLHLSPNRSSLCSSITFHPFPLNLSHSFQLSLQPQPFFSLTTKQQSNNHFFRRRCTNSVATLNTQIASFISLFQQIGIGFVETQTLFTNNPDLTSLPLDSLRTRLLSLHSLGFDRVTLYQLVTKRPTVLTDKEIDPLLTFLRDELQGEIEKEQLNRLFFATEPRFLVGFPQKVQLLIDRGVPVYKVVHVLNKVNLQKALCYRAVDEIDKIIAFLEPFSGISLILKRPAVLNFDLESQLVPRVNVLTELSGGDDDSVGKVLLRFPAFLNYSVEHVEEHVEFLRSFVDLGDQEIFRIILGFPAIVTASRERKLRPRIQFLKDCGLDSGDIFKFLIKAPLFLSHSFYGNIVHKLVLLVKIGYRYRTRDLAMAMRSATRTNCENLRKVIGLFLSYGLTCEDIVAMAKKHPQILQYNNASLEKKMKYLIEEMERDIEELLVFPAFLGYKFDDRIKHRFEVKKSTRGGGMSINKLLTVSNERFTGK* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0604 482 Gene3D Transcription termination factor 3, mitochondrial 40 251 IPR038538 -
Apr1g0604 482 Gene3D Transcription termination factor 3, mitochondrial 287 482 IPR038538 -
Apr1g0604 482 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF8, CHLOROPLASTIC 79 480 - -
Apr1g0604 482 SMART mt_12 295 326 IPR003690 GO:0003690|GO:0006355
Apr1g0604 482 SMART mt_12 86 116 IPR003690 GO:0003690|GO:0006355
Apr1g0604 482 SMART mt_12 331 362 IPR003690 GO:0003690|GO:0006355
Apr1g0604 482 SMART mt_12 433 465 IPR003690 GO:0003690|GO:0006355
Apr1g0604 482 SMART mt_12 259 289 IPR003690 GO:0003690|GO:0006355
Apr1g0604 482 SMART mt_12 222 253 IPR003690 GO:0003690|GO:0006355
Apr1g0604 482 SMART mt_12 401 432 IPR003690 GO:0003690|GO:0006355
Apr1g0604 482 Coils Coil 415 435 - -
Apr1g0604 482 Pfam mTERF 72 345 IPR003690 GO:0003690|GO:0006355
Apr1g0604 482 Pfam mTERF 317 479 IPR003690 GO:0003690|GO:0006355
Apr1g0604 482 PANTHER CGI-12 PROTEIN-RELATED 79 480 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Apr1g0604 mTERF 4.6e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0604 - - gmx:100799904 631.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0604 1 7280309 7284034 Apr1g0604 1 7280309 7284034 ECH