Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0573 ATGGAGACTCTTAAAGCTGCGATTCCAGAAGGCCTGAAGCGAGTGATTGGCGATAGCACTGTCGATGATCTTCGCAACACGTGTTCTTCTCTTCACCACTTCTTTCTCCAGTTCGAGCCATTTCAGCAGATGGTCACTGAACTGGCCGATCCTAAATATGCTCTGTGCGGTAAGAGTAAGGACGCTGCGTTGGAATCGAAACAGCTTGGCAATCAGTGCTTCTTCAACGCAGATTATGCCAAGGCTTTGGAGTGCTATACTCAGGCCTTGCGCAAGGCTCCCTTGGACACTGGCCATAATCTGGTTGCAACGTTGTATATCAATCGAGCTACTGTATTGCATAAAATGAGTCTTTTAGTTGAATGTTTGCGAGATTGCACTCGAGCTCTTCAGATATGTCCAAGCTATCCAAAGGCATGGTACAGGAGAGGTAAGGTGAATGCTTCATTGGGAAATTATAAAGATGCGATCAGCGACCTAAATGTGGCTAAGAGTATGGAATCTTCAATGAGTGGGAAGAGAAAAATAGAAGGTGAACTGAATACCATTTTAGACCAGTGCAAGGGCATGAGTACTGTAGTACAGCCACAGCATAAGGAGAACAGCTTGAAAACTGTGGGTGAGATCCCCCAAATAACACTACAGTGTGTCTCAATGCCTGATAAAGGAAGAGGCATGGTGTCATCATGTGTCATTTCACCTGGGTCTTTGGTTCATGCTGAAGAACCTTATGCTATGATAATATTAAAGCAATGTCGAGAAACTCATTGCCATTATTGCTTGAATGAGCTACCTGCTGATAAAGTTCCTTGTATATCATGTTCAATACCATTGTATTGCTCCCACCAATGCCAAGTACAGGCAAGCGGGCAAATGTTCAGGATCTTCCATGAAAATAATGACATTCTTAAAAACTTATCAAGTGATCTTGGAGAATATGCTGCTGAAGTTATTCAATGCAGTGTTTCTGAACTAGAAATTAAGGATATTACTGAACATAAACATGAATGTCAAGGTGTACATTGGCCTATGGTACTGCCGTCTGAGATAGTTTTGGCTGGCCGAATACTAGCAAGGTTTTTACTGAATTGTACACTTGAAGATATTATAAAATTCGTGGAAAATCTGGAGCTTTCTCACTGTTACAATCATATGCCATCTGAAAGCAAATTGGATTCACATATATATGCCAGTGTATTATTATATTGTCTTCAACACTCATTTGGGGCTATGTTTTCCATAGATGGAGTCTCTATATCACAGGTTGTCATTATTATTTCTCAAATTAAAGTGAATTGTATGACTATTGTTCGTTTAAAATCGATAGACACTCCCAGACTATCAGATCATTTTGGAGAATTTTCATCTCATTTTGACACTCATTTGACCAGTAATGTGGAACAGGTCAGAGTAGGTAAAGGTATTTATAAAGCTGGCAGTTTATTCAACCATTCTTGCCAACCAAATGTTCATGCATATTTTCTTTCACGCACTCTCTATTTACGAACCACAAAAGTTGTAGCAGCTGGGAGTCAGCTGGAATTGTCTTATGGTCCACAGGTTGGGTTATGGGATTGTGATGATCGCATTAATTTTCTCAAAGATGAGTATGCATTTCATTGTCAGTGTACTGGTTGTTCAGAAGTCAATCTATCTGATCTTGTTCTCAATGGCTTTCATTGTGTCAATCCAAATTGTTCTGGTGCTGTGTTGGGAAGCAGAGTACTTGACCGTGAAAAGCAGAAAATCAAGCACTACCATATTACTGACAATGTTGACAAGAGCGATGACATTTATGAAGTGTGCTTTCACTTGTTCAAACAAAATGGTGCCTCTATTCATATTCAACCTGGATACTGTTTGAAATGTGGTTCTTACTGTGATATGAAGTCTTCACATGCTGCAGTTGATAAAGCTTTAATATGCATTAAAAGGTTACAGGATGCAATATTGTCTAAAGAAATTTCACATGCTACTATTTCTGATGCTTTGAGATCTCTTCATTTGTTGAAATCAAATTTGCATGCATACAACAAGCTTATTGCAGAGGCAGAAGACAACCTTGCCCAGGCTTTTTGTTTGGTGGGAGAATTACAGTTATCTGTGAATCATTGTAAAGCATCTATCCAGATTCTGGAAAAGCTGTATGATCCTGATGATATTGTTATTGCTTATGAACTTCTGAAACTTTCTTCCATCCAACTTTCCTTGGATGATGGTACTGCCGTGGACAGCATAAATCGAATATGTGACATCTTCTCATGTTATTATGGACTTCATGCAGACCTAGTCTTCCCCTATCTTAAATACCTTAGGAGAGAAATTGAGAAGGTTTCAGTGAAGGCTCTCCAATCAAATGCTTTTCCCACAAGGTGA 2376 0.3948 METLKAAIPEGLKRVIGDSTVDDLRNTCSSLHHFFLQFEPFQQMVTELADPKYALCGKSKDAALESKQLGNQCFFNADYAKALECYTQALRKAPLDTGHNLVATLYINRATVLHKMSLLVECLRDCTRALQICPSYPKAWYRRGKVNASLGNYKDAISDLNVAKSMESSMSGKRKIEGELNTILDQCKGMSTVVQPQHKENSLKTVGEIPQITLQCVSMPDKGRGMVSSCVISPGSLVHAEEPYAMIILKQCRETHCHYCLNELPADKVPCISCSIPLYCSHQCQVQASGQMFRIFHENNDILKNLSSDLGEYAAEVIQCSVSELEIKDITEHKHECQGVHWPMVLPSEIVLAGRILARFLLNCTLEDIIKFVENLELSHCYNHMPSESKLDSHIYASVLLYCLQHSFGAMFSIDGVSISQVVIIISQIKVNCMTIVRLKSIDTPRLSDHFGEFSSHFDTHLTSNVEQVRVGKGIYKAGSLFNHSCQPNVHAYFLSRTLYLRTTKVVAAGSQLELSYGPQVGLWDCDDRINFLKDEYAFHCQCTGCSEVNLSDLVLNGFHCVNPNCSGAVLGSRVLDREKQKIKHYHITDNVDKSDDIYEVCFHLFKQNGASIHIQPGYCLKCGSYCDMKSSHAAVDKALICIKRLQDAILSKEISHATISDALRSLHLLKSNLHAYNKLIAEAEDNLAQAFCLVGELQLSVNHCKASIQILEKLYDPDDIVIAYELLKLSSIQLSLDDGTAVDSINRICDIFSCYYGLHADLVFPYLKYLRREIEKVSVKALQSNAFPTR* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0573 791 Gene3D Tetratricopeptide repeat domain 523 778 IPR011990 GO:0005515
Apr1g0573 791 Coils Coil 667 687 - -
Apr1g0573 791 Gene3D SET domain 225 255 IPR046341 -
Apr1g0573 791 Gene3D Tetratricopeptide repeat domain 37 190 IPR011990 GO:0005515
Apr1g0573 791 SUPERFAMILY TPR-like 63 715 IPR011990 GO:0005515
Apr1g0573 791 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 774 - -
Apr1g0573 791 SUPERFAMILY SET domain 217 543 IPR046341 -
Apr1g0573 791 Gene3D SET domain 418 517 IPR046341 -
Apr1g0573 791 Gene3D - 256 289 - -
Apr1g0573 791 ProSiteProfiles SET domain profile. 210 518 IPR001214 GO:0005515
Apr1g0573 791 SMART tpr_5 63 96 IPR019734 GO:0005515
Apr1g0573 791 SMART tpr_5 137 170 IPR019734 GO:0005515
Apr1g0573 791 SMART tpr_5 682 715 IPR019734 GO:0005515
Apr1g0573 791 SMART tpr_5 103 136 IPR019734 GO:0005515
Apr1g0573 791 Pfam SET domain 223 518 IPR001214 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Apr1g0573 SET 2.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0573 K24634 - gmx:100783548 1284.63