Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr1g0562 | ATGAAGTTGCAGTTATCAATTGTTGCTCTTGTTCTATTAAGCTCCACACTGTCTCTCTTTGGCTTGAGTGTAGCTGACTTGAACTCTGACCAAAAAGCTCTCTTGGAGTTTGCTGCTTCTGTCCCACATGCACCAAGGCTCAACTGGAATGACTATTCTTCAATATGTACCTCATGGCTTGGGGTGACTTGCAACTCAAATGGCACACGTGTCGTAGGCCTCCACCTTCCAGGAATGGGATTAACAGGGTCCATTCCAGAGAACAGCATAGGAAAACTAGATGCTCTAAGGGTCCTGAGTCTTCATTCCAATGGCCTTAAAGGAAATATTCCTTCTAACATCCTTTCCATTCCTTCACTCCAATTTGCACACCTACAGCACAATAACTTCTCTGGCCTAATTCCTTCTCCTGTGTCCCCTAAACTCATTGCATTGGATATTTCCTTTAACTCATTTTCTGGCAATATCCCACCTACATTTCAGAACCTTAGAAGACTCACGTGGTTGTACCTCCAAAACAACTCCATATCAGGATTTATTCCTGACTTTAACCTTCCAAGTCTCAAATATTTGAATTTGAGCTATAATAACTTGAATGGCTCAATTCCAAGTTCCATCAAGACATTCCCTTCTACTTCTTTTGTTGGAAACTCTCTCTTATGCGGTCCACCTCTCAATCATTGCTCTACAATCTCCCCTTCTCCCTCTCCTTCTTCTGATTACCAGCCGAGTACTCCAGAAACCACTCAAAACCAAAAAGCTACAACACATAAGAAAAGCTTTGGCCTAGCTACTATCCTTGCACTCGTCATTGGGAGCATTGCCTTCCTCTCTCTACTAGTTGTAATAATCTCTGTGTGCTGTTTGAAGAGGAAGAAAAACATTAAAAGCAGTGGCATACTGAAAGGAAAGGCTTCTTGTGCTGGAAAGCCTGAGGTTTCAAAGAGTTTTGGGAGTGGTGTGCAAGGGGCTGAAAAGAACAAGTTGTTTTTCTTTGAAGGTTCATCTTATAGCTTTGACCTTGAGGATTTGCTAAAGGCTTCAGCTGAAGTTCTAGGAAAAGGGAGCTATGGAACAGCATACAAGGCTGTTTTGGAGGAAGGAACAACAGTGGTAGTTAAAAGGTTGAAGGAAGTTGTGGTTGGAAAGAAGGAGTTTGAGCAGCATTTGGAGATTGTGGGAAGAATTGGACACCATCCCAATGTCATGCCCCTTAGAGCTTATTACTATTCCAAAGATGAGAAACTTCTAGTTTACAACTACATGCCAGGTGGCAGCTTGTTTTTCTTGTTGCATGGAAACAGGGGTGCAGGAAGAACTCCATTAGATTGGGATTCCAGAGTGAAGATTTCACTTGGAGCTGCAAAGGGAATAGCATTCATTCACTCAGAGGGTGGTCCAAAATTCACACATGGCAACATAAAGTCAACCAATGTGCTCATAACCCAAGAACTTGATAGCTGCATCTCTGATATTGGTTTGCCTCCTCTAATGAACACACCAGCAACCATGTCTAGATCCAATGGTTATAGAGCACCAGAAGTTTCTGATTCAAGAAAGATCACTCAAAAATCTGATGTATACAGCTTTGGTGTGCTGCTGCTTGAAATGCTAACAGGAAAGAGCCCAATGAGATATCCTGGTCATGAAGATGTGGTTGATCTTCCAAGATGGGTGAGGTCTGTTGTTAGAGAGGAATGGACAGCTGAAGTCTTTGATGAGGAGCTTCTGAGAGGGCAATATGTTGAAGAGGAAATGGTGCAAATGCTTCAGATTTCATTAGCATGTGTAGTTAAGGTGCCAGATATGAGGCCTAGAATGGATGAAGTTGTTAGAATGATAGAGGAAATTAAGCATCCTGAGATGAAGAACCGGCCATCTTCTGAGTCTGAGTCTGCTGTGCAGACACCATAA | 1914 | 0.4253 | MKLQLSIVALVLLSSTLSLFGLSVADLNSDQKALLEFAASVPHAPRLNWNDYSSICTSWLGVTCNSNGTRVVGLHLPGMGLTGSIPENSIGKLDALRVLSLHSNGLKGNIPSNILSIPSLQFAHLQHNNFSGLIPSPVSPKLIALDISFNSFSGNIPPTFQNLRRLTWLYLQNNSISGFIPDFNLPSLKYLNLSYNNLNGSIPSSIKTFPSTSFVGNSLLCGPPLNHCSTISPSPSPSSDYQPSTPETTQNQKATTHKKSFGLATILALVIGSIAFLSLLVVIISVCCLKRKKNIKSSGILKGKASCAGKPEVSKSFGSGVQGAEKNKLFFFEGSSYSFDLEDLLKASAEVLGKGSYGTAYKAVLEEGTTVVVKRLKEVVVGKKEFEQHLEIVGRIGHHPNVMPLRAYYYSKDEKLLVYNYMPGGSLFFLLHGNRGAGRTPLDWDSRVKISLGAAKGIAFIHSEGGPKFTHGNIKSTNVLITQELDSCISDIGLPPLMNTPATMSRSNGYRAPEVSDSRKITQKSDVYSFGVLLLEMLTGKSPMRYPGHEDVVDLPRWVRSVVREEWTAEVFDEELLRGQYVEEEMVQMLQISLACVVKVPDMRPRMDEVVRMIEEIKHPEMKNRPSSESESAVQTP* | 638 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr1g0562 | 637 | Pfam | Leucine rich repeat N-terminal domain | 28 | 65 | IPR013210 | - | |
Apr1g0562 | 637 | Gene3D | Transferase(Phosphotransferase) domain 1 | 422 | 635 | - | - | |
Apr1g0562 | 637 | CDD | STKc_IRAK | 352 | 617 | - | - | |
Apr1g0562 | 637 | Pfam | Leucine rich repeat | 141 | 198 | IPR001611 | GO:0005515 | |
Apr1g0562 | 637 | Gene3D | Ribonuclease Inhibitor | 28 | 139 | IPR032675 | - | |
Apr1g0562 | 637 | MobiDBLite | consensus disorder prediction | 232 | 254 | - | - | |
Apr1g0562 | 637 | ProSitePatterns | Protein kinases ATP-binding region signature. | 352 | 383 | IPR017441 | GO:0005524 | |
Apr1g0562 | 637 | SUPERFAMILY | Protein kinase-like (PK-like) | 350 | 617 | IPR011009 | - | |
Apr1g0562 | 637 | Pfam | Protein kinase domain | 350 | 611 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr1g0562 | 637 | PANTHER | RECEPTOR-LIKE KINASE | 3 | 636 | - | - | |
Apr1g0562 | 637 | PANTHER | OS05G0588300 PROTEIN | 3 | 636 | - | - | |
Apr1g0562 | 637 | Gene3D | Phosphorylase Kinase; domain 1 | 313 | 421 | - | - | |
Apr1g0562 | 637 | MobiDBLite | consensus disorder prediction | 618 | 637 | - | - | |
Apr1g0562 | 637 | Gene3D | Ribonuclease Inhibitor | 140 | 230 | IPR032675 | - | |
Apr1g0562 | 637 | ProSiteProfiles | Protein kinase domain profile. | 346 | 622 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr1g0562 | 637 | SUPERFAMILY | L domain-like | 40 | 226 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr1g0562 | Apr-Chr1 | 6871234 | 6875755 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr1g0562 | 5 | 632 | Receptor kinase-like Gene Family | AT5G58300 | 60.890 | 0.0 | 745 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Apr1g0562 | Pkinase | 2e-33 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr1g0562 | - | - | aprc:113868460 | 1198.34 |