Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0554 ATGGCTTCTGCACCTTCTTCTTCAAATTGGGTAATGGAAAGCTCTGATGTTCCTCATGTTTTGGCTGTTGATGATAATCTCATTGATCGCAAACTTGTTGAGAAACTCCTCAGGAATTCTTCTTGCAAAGTTACAACTGCAGAAAATGGGCCTAGGGCATTGGAGTTATTGGGTTTGGCAAGTGGTGGACAGAACAACTTGAATGGGAGATCCAAAGTAAATTTGGTTATCACAGACTATTGCATGCCAGGGATGACAGGCTATGAGCTACTAAAGAAAATTAAGGAATCATCTGTAATGAAGGAGGTTCCAGTAGTGATCATGTCATCTGAGAACATACCAACTCGGATTAACAAGTGTCTGGAAGAAGGAGCTCAGATGTTCATCTTAAAGCCCCTCAAACAATCCGACGTAAAAAAACTGACATGTCAGTTAATGAATTGA 444 0.4054 MASAPSSSNWVMESSDVPHVLAVDDNLIDRKLVEKLLRNSSCKVTTAENGPRALELLGLASGGQNNLNGRSKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVIMSSENIPTRINKCLEEGAQMFILKPLKQSDVKKLTCQLMN* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0554 147 ProSiteProfiles Response regulatory domain profile. 19 146 IPR001789 GO:0000160
Apr1g0554 147 SMART REC_2 18 142 IPR001789 GO:0000160
Apr1g0554 147 Gene3D - 19 147 - -
Apr1g0554 147 CDD REC_typeA_ARR 20 141 - -
Apr1g0554 147 Pfam Response regulator receiver domain 20 140 IPR001789 GO:0000160
Apr1g0554 147 PANTHER TWO-COMPONENT RESPONSE REGULATOR 7 146 IPR045279 GO:0009736
Apr1g0554 147 SUPERFAMILY CheY-like 18 145 IPR011006 -
Apr1g0554 147 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR17-LIKE 7 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0554 Apr-Chr1 6729192 6730931 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0554 19 147 Response Regulator Gene Family AT3G56380 74.809 1.26e-63 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Apr1g0554 Response_reg 2.1e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0554 K14492 - gmx:100499827 277.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0995 9 19064676 19065609 Apr1g0554 1 6729192 6730931 PCT