Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0542 ATGGATCTTGAATCAAGGAAGTGTTGGGACACCTCTAAGAAGGATTCTTGGAAGACTATTCTGCTCTTGGCCTATCAAAGCCTTGGTGTGGTATATGGGGACTTGAGCATTTCTCCACTGTATGTTTACACCAGCACATTTGCAGAAGATATTGAACATTCAGAGACCAATGAAGAGATTTTTGGTGCCCTATCTTTTGTTTTTTGGACACTTACATTGGTGCCACTGTTCAAATACGTTTTTGTGGTTCTTCGAGCTGATGATAATGGAGAGGGTGGTACATTTGCTCTATATTCCTTGATTTGTAGGCATGCTAAAGTTAGTCTTCTGCCAAATCGACAACATGCTGATGAAGCGCTTTCTACATATAAGATGGAGGAGCATCCAGAGAAGAATACTTCTAGAGTGAAGATGGTGCTAGAGAAATATAAGACCTTGCATACAGCTCTCCTAATTGTTGTTCTTCTTGGCACTTGTATGGTAATAGGGGATGGACTACTTACCCCAGCTATTTCTGTTTTCTCTGCAGTATCTGGTCTTGAGGTATCTATGTCCAAGAAACACCACCAGTATGCTGTGATTCCCATCACTTGCTTCATACTGGTGTGTTTGTTTGCACTCCAACACTATGGTACACATAGGGTGGGATTCCTTTTTGCTCCAATTGTGTTGACATGGCTACTGTGCATCAGCACACTTGGTTTATATAATATATTTAAATGGAATCGACATGTATATAAAGCTCTTTCACCATATTATATGTTCAAGTTCTTGAAGAAGACAAGGATAAGCGGATGGATGTCTTTGGGTGGAATATTGCTGTGCATAACAGGCTCAGAAGCTATGTTTGCTGATCTTGGCCATTTCTCATATATGGCCATTCAGACTGCATTCACCTTTCTGGTATATCCTGCGCTCATATTGGCATATATGGGTCAAGCTGCTTATTTGTCCCAGCATCATGATTCCGAACTCCAAATCAGTTTCTATGTCTCAGTTCCAGAAAGCGTGAGGTGGCCTGTGCTTATCTTAGCTATTCTAGCCTCTGTTGTGGGAAGCCAAGCAATCATTAGCGGAACATTTTCCATCATAAACCAGAGCCAATCTCTAGGTTGCTTTCCAAGAGTTAAGGTTGTTCATACATCTGACAAGATACATGGTCAGGTCTACATTCCTGAAATTAATTGGATACTCATGATCCTCTGCATTGCTGTGACCATTGGATTTAGGGACACAAAACACATGGGAAATGCTTCAGGGTTAGCAGTGATGACTGTGATGCTGGTAACAACATGCCTTACTTCCTTAGTAATCATACTTTGTTGGCGTAAACCCCCTATTATAGCCCTTTGTTTCCTATTGTTTTTTGGCTCTATTGAACTGCTATATTTCTCAGCTTCCTTGACAAAGTTTTGTGAGGGTGCCTGGTTCCCTATCCTGCTGGCTCTCTTCCTTATGATAATAATGTTCCTCTGGCACTATGCAACCATCAAGAAATACGAATTCGACCTTCACAACAAGGTGTCACTAGATTGGCTTCTAGCCTTAGGTCCAAGCTTAGGAATTGCAAGAGTCCCCGGAATAGGCCTTGTATTCACTGATCTCACAACCGGCATCCCGGCAAACTTCTCTCGTTTTGTCACCAACCTCCCTGCATATCACCGCATCCTTGTTTTTGTGTGTGTGAAATCAGTGCCAGTCCCTCATGTCCCTGCTGCTGAGAGATACCTTGTAGGCCGTGTAGGACCGGCTGCTCATCGGTCCTACAGGTGTATAGTCAGATATGGATATCGCGACGTTCATCAGGATGTTGATTCCTTTGAGTCTGAACTAGTAGCAATGCTTGCTGATTTCATCCAATATGATTGGTATAGGACTAGGAGGAGTAGCATGAGCACTGAGGATGATGCTTCACACTCTAATGAATCATCAAGTCACAGATTAACAGTAATTGGAACAACTGGTTTCTCCAGCCAACCAGGATATGAGAGTGGGGATAGTGTCCAACAAGCAAGTGTATCTGTTGGGTTCCAAACTGTGCAAAGTGTGACTGATGTTATTGAGATGGAACCAATGGGTGTGACTGAGAGAAGAGTGAGATTTGCTATTGATGATGAGCCTGAATGCGATGCAAGGTCTGAGGTAGGAGTGCAAATGCAGGAAGAACTAGAAGATCTTTATGCTGCTCAAGAAGCTGGTATTGCATTCATTCTTGGTCATTCTCATGTAAGAGCAAAGCAAGGTTCATCTTTTCTCAAGAAATTGGCACTTAACTATGGTTACAATTTCTTGAGAAGGAATTGTCGTGGCCCTGATGTAGCACTTAAGGTTCCCCCAGTTTCTCTTTTGGAAGTTGGCATGGTTTATATTGTGTAG 2376 0.4247 MDLESRKCWDTSKKDSWKTILLLAYQSLGVVYGDLSISPLYVYTSTFAEDIEHSETNEEIFGALSFVFWTLTLVPLFKYVFVVLRADDNGEGGTFALYSLICRHAKVSLLPNRQHADEALSTYKMEEHPEKNTSRVKMVLEKYKTLHTALLIVVLLGTCMVIGDGLLTPAISVFSAVSGLEVSMSKKHHQYAVIPITCFILVCLFALQHYGTHRVGFLFAPIVLTWLLCISTLGLYNIFKWNRHVYKALSPYYMFKFLKKTRISGWMSLGGILLCITGSEAMFADLGHFSYMAIQTAFTFLVYPALILAYMGQAAYLSQHHDSELQISFYVSVPESVRWPVLILAILASVVGSQAIISGTFSIINQSQSLGCFPRVKVVHTSDKIHGQVYIPEINWILMILCIAVTIGFRDTKHMGNASGLAVMTVMLVTTCLTSLVIILCWRKPPIIALCFLLFFGSIELLYFSASLTKFCEGAWFPILLALFLMIIMFLWHYATIKKYEFDLHNKVSLDWLLALGPSLGIARVPGIGLVFTDLTTGIPANFSRFVTNLPAYHRILVFVCVKSVPVPHVPAAERYLVGRVGPAAHRSYRCIVRYGYRDVHQDVDSFESELVAMLADFIQYDWYRTRRSSMSTEDDASHSNESSSHRLTVIGTTGFSSQPGYESGDSVQQASVSVGFQTVQSVTDVIEMEPMGVTERRVRFAIDDEPECDARSEVGVQMQEELEDLYAAQEAGIAFILGHSHVRAKQGSSFLKKLALNYGYNFLRRNCRGPDVALKVPPVSLLEVGMVYIV* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0542 791 Pfam K+ potassium transporter 25 599 IPR003855 GO:0015079|GO:0016020|GO:0071805
Apr1g0542 791 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 791 IPR003855 GO:0015079|GO:0016020|GO:0071805
Apr1g0542 791 PANTHER POTASSIUM TRANSPORTER 2 1 791 - -
Apr1g0542 791 TIGRFAM kup: potassium uptake protein 23 790 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0542 Apr-Chr1 6607160 6612232 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0542 1 791 Inorganic Solute Cotransporters AT2G40540 78.234 0.0 1265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0542 K03549 - gmx:100783540 1489.55