Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0528 ATGCCTTTCACAGGATCTCAAATAACCAACGAATCGTGGCGGCCCTGTCTCTTTGGCGCCGCTACTCCCATCACACGCACGCCCATTTCCATTTTCATCGCCCAAAGAGGAACAAGTTTTGTGTGTGTGGTGATGGAAAACGCGGGGTTTGTTCCTTCTCATGACACAAACACTTTCGACTGGAGCAACGCCACACTCGCTCATTTTACCAATGATGCACCCAATGCACTGTCCCAACAACTAAATACTTCTTTTGGACTTGAACCCTTAATCGACCCGATCATCCAACAGGGCCATCTTCCCTTTGCGGATCCAATCATCCAACAGGGTAGTCTTCCCTTTGCGGATCCAATGGTCCAAGATCACTTCATGCACAACAATGGAGGAACAGGGAACTTTCCAGAGGGTCCATCGTTGCCTGACCCTGAAAATGAGAATTTAGAGTTCAACGAAGTGTTACCACTTTCGCATTGGCCCCAATCACCAGCCCCATTCTTTTGCAGTTGCTGTCATGTTTTGAGAGAAATAATTCACACCAACGGTACAAATTTTCAAAAACTTGAGATTCATGGAACGCTCGGCTTGATTACCCATGCAATTCACCGTCAAAATATCACAGGGGCTGATCCTAATAGCGTTCAATATGAAATGATTGATTTTTGCTACAGAAACTCAGATGAAATTAAGACTTTTTTAGTAAATTACTGCGCACAGCAAGCTTCATCGGGGTACATTATTGTGCAAGATCCGTTGTCTACCTATTATGAGACCCTCTGCACTGGACTAGACTGGACTGAAGATTTAAGTGATGAATGCATCGATTTGAATCCAAATAATTCAGCAAATGAGATGGAGCAAGAGGCTGAGAATGGAACGGGTACTAAAATTTCCCTCGCGTCACAGAGGGAGAGAGCAAGGAGGATGAAATTGAGTGATTTCAGCGATTACTTTCATCTACCAATTGAGGAAGCATCGAGACAAGTGAGTTTATGCCCCACGGTGGTGAAGAAAATTTGCCGCAGGGCAAAATTAAAACGATGGCCTTATAGAAAGGTGAAAAGCATTACAAAGGAGATCGAATTATTGAGAAGAGCACTTGAGTCAGAAGATGCAATGTCAAGGGCAAGAACTCAAGAGGATATTAACAGACTTGTACAGCAAATGATTCGCCATTGTGGTGGAGTTCTCCCAACCGCAATAGATATCAACCCATTGTAA 1218 0.4392 MPFTGSQITNESWRPCLFGAATPITRTPISIFIAQRGTSFVCVVMENAGFVPSHDTNTFDWSNATLAHFTNDAPNALSQQLNTSFGLEPLIDPIIQQGHLPFADPIIQQGSLPFADPMVQDHFMHNNGGTGNFPEGPSLPDPENENLEFNEVLPLSHWPQSPAPFFCSCCHVLREIIHTNGTNFQKLEIHGTLGLITHAIHRQNITGADPNSVQYEMIDFCYRNSDEIKTFLVNYCAQQASSGYIIVQDPLSTYYETLCTGLDWTEDLSDECIDLNPNNSANEMEQEAENGTGTKISLASQRERARRMKLSDFSDYFHLPIEEASRQVSLCPTVVKKICRRAKLKRWPYRKVKSITKEIELLRRALESEDAMSRARTQEDINRLVQQMIRHCGGVLPTAIDINPL* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0528 405 PANTHER RWP-RK DOMAIN PROTEIN 117 394 - -
Apr1g0528 405 PANTHER PROTEIN RKD4 117 394 IPR044607 GO:0003700
Apr1g0528 405 Pfam RWP-RK domain 308 355 IPR003035 -
Apr1g0528 405 ProSiteProfiles RWP-RK domain profile. 295 375 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0528 Apr-Chr1 6458578 6460387 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0528 306 368 NLP Transcription Factor Family AT4G24020 34.921 3.53e-10 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Apr1g0528 RWP-RK 9.3e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0528 - - aprc:113850591 840.106