Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0527 ATGTCCAGAGAAAGGGAGAGATTTGATGAGATAGGGAAGAAGATCAAGAGGGAAGGAGATGTTTCTTCTCAAATGGGAAGAAGACATATGTTGGGCCCTCCTGGAACCCTAAATACTATCACCCCTTGCGCAGCATGTAAGCTACTGAGAAGAAGATGTGCTCAAGAATGTCCCTTTTCTCCATATTTCTCTCCTCATGAGCCCCAAAAGTTTGCTTCTGTCCACAAAGTTTTTGGTGCCAGTAACGTCTCAAAGATGTTAATGGAAGTACCAGAGTGTCAGAGAGCTGATGCTGCAAATAGTCTAGTTTATGAGGCTAATGTGAGGCTAAGAGACCCTGTGTATGGATGCATGGGTGCAATTTCTGCTTTGCAACAGCAAGTTCAAACTTTACAAGCTGAACTTAATGCAGTGAGGGCTGAAATACTTAAATACAAACTCAGGGAAGCCAACATGATACCCTCCTCTCATGTTACAATGCTACCTTCCTCTGGGGCTGTTTCGCTTGCTGTTCCACCGCCACCACCTCCTCCTCCCCTACCACCACCTCCTCCTCCTCTTCCTCCAACTTCTTCCTCTTCTTCCATGTACATCCAACAGAGGGATCCCACCAATTATAGCACAATTTCAAGTGATAATATTTCCTATTTTGGTTAA 657 0.446 MSRERERFDEIGKKIKREGDVSSQMGRRHMLGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPECQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQTLQAELNAVRAEILKYKLREANMIPSSHVTMLPSSGAVSLAVPPPPPPPPLPPPPPPLPPTSSSSSMYIQQRDPTNYSTISSDNISYFG* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0527 218 Coils Coil 121 148 - -
Apr1g0527 218 PANTHER LOB DOMAIN-CONTAINING PROTEIN 15 26 218 - -
Apr1g0527 218 MobiDBLite consensus disorder prediction 167 218 - -
Apr1g0527 218 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 26 218 - -
Apr1g0527 218 ProSiteProfiles LOB domain profile. 41 142 IPR004883 -
Apr1g0527 218 Pfam Lateral organ boundaries (LOB) domain 42 139 IPR004883 -
Apr1g0527 218 MobiDBLite consensus disorder prediction 192 218 - -
Apr1g0527 218 MobiDBLite consensus disorder prediction 168 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0527 Apr-Chr1 6450510 6451800 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0527 27 218 AS2 family AT2G40470 73.232 1.23e-74 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Apr1g0527 LOB 2.6e-40 No_clan