Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0526 ATGAATTCCAAACCCAACTGCTTCTTCTTCTTCCTCTCTGTCTCGCTTCTTCTCTTAAGTTCTCCTTCTGAACCCTCCTCACCGGAGCTCCGATCTCTACTCGAATTCAAGAAGGGGATAACCCTAGATCCTCTCAAGCTTCTAGAATCATGGAACCCTTCTTCACTTCCAGGCTCCACCGTCGCCTGTCCACGCTCCTGGAGGGGCGTTCTCTGCGACGACGTCACCGGAAACGTCACCGGCATCGTCCTCGACCGCCTCCGCCTCGGCGGTGAACTCAAGTTCCACACTCTCCTCGACCTCAAGATGCTCAAAAACCTAAGCCTCTCCGGCAACGACTTCACCGGCCGGTTACCCCCTTCTCTCGGCTCACTCAGCTCGCTCCAGCATTTGGATCTTTCTCACAACAACTTCTACGGACCCATCCCTGCTCGGATCAACGACCTTTGGGGTCTCAATTACCTCAATTTGTCAAATAACCAATTCAAAGGTGGGTTCCCCAGTGGCCTCAACAACCTTCAGCAACTTAGGGTTCTTGATTTGCACTCAAATCAACTCTGGGCCCAAATTGGGGACCTTCTCTCCACGTTACGGAATGTGGAGTATGTTGATTTGAGTCTCAACCAGTTCTACGGTGGCCTTTCGCTCACCGTGGAAAACGTTTCGGGTTTGGCTAACACCGTTCATTTTTTGAACTTGAGTCACAACAACTTGAACGGTCATTTCTTTGAAAGTGACACCATCGGGTTGTTTCGGAACTTGCAAGTTTTGGACTTGACTAACAACTCTTTCAGGGGTGAGCTTCCTTCTTTTGGCTCCTTGCCCAGCCTTCGGGTTCTGCGCCTTCGCCGTAATTTCTTCTTTGGCTCCGTACCCGATGAGCTTTTGCAGAATTCTGTCTCTTTGGAGGAATTGGATCTTAGCTACAATGGGTTTACTGGATCAATTGCCATAATCAACTCTACAACTTTAAATATTTTGAATCTCTCGTCAAATAGTTTATCAGGCTCCTTGCCAGCTTCTTTGAAAAGATGTACAGTCATTGACTTGAGCAGGAACATGTTTTCTGGTGACATTTCTGTTATACAGAACTGGGAAGCCACATTGGAAGTTATTGATCTGAGTTCAAACAAGCTGTCCGGATCCTTGCCTTCAATTTTAGGCTCCTATTCAAAATTGTATACTGTTGACTTGAGTTTAAATGAACTTAATGGATCCATTCCACGTAGTTTAATTACTTCGTCATCAGTGACAAGGCTAAATCTTTCTGGAAATCAGTTTACCGGGCCACTTCTGCTTCAAGGTTCAGGGGCAAGTGAATTACTACTTATGCCTCCTTATCAGCCAATGGAATATCTTGATGTGTCTAATAACTCCTTGGAAGGTGTCTTGCCTTCTGATATAAGTAGGATGGGTGGGCTCAAGCTACTGAATCTGGCAAGGAATGGCTTTTCTGGACAGCTGCCAAATGAATTGAGCAAACTCATTTATTTGGAGTACCTTGATTTGTCGAACAACAAATTTACTGGAAATATTCCTGATAAGCTTTCATCCAGCTTAACTGTATTTAATGTGTCCAATAATGATCTCTCTGGCCGTGTTCCTGAAAATTTGAGGCAGTTCCCTCCTTCATCCTTTCAACCTGGAAATGAAGAGCTAATATTACCTACTAATTCTCCTGAAACTTCTTCAGTGCCAGATAATATTCCAGATAAGGGTAGACATCATAGTTCAAAGGGTAATATCAGGATAGCAATTATTCTTGCTTCAGTGGGTGCTGCTGTGATGATTGCTTTTGTTTTATTGGCTTATCATCGAACCCAATTAAAAGAATTTCATGGAAGAAGTGATTTCACTGGTCAAAATGCTAGAAGAGATGTCAAGTTAGGAGGACTTACGAGGCCCTCTCTCTTCAAGTTCCATACAAATGTTCAACCCCCAACAACTTCGTTGAGCTTTTCAAATGATCACTTGTTGACTTCCAATTCAAGGTCACTCTCTGGACAGTCAGAGTTTATAACTGAAATTTCTGAGCATGGCGTACCTCAGGGAATGGTAGCAACTAGTTCAGCATCTGTAAATCCTAATTTGATGGATAACCCGCCCACCTCATCTGGAAGGAAGTCTTCTCCTGGTTCTCCATTGTCATCCTCACCCCGTTTTATAGAGGCTTGTGAAAAGCCAGTGATGTTGGATGTTTACTCACCAGATCGGCTGGCTGGGGAACTGTTCTTCCTCTATTCTTCATTAGCATTTACTGCAGAGGAATTATCTCGAGCTCCAGCTGAAGTTCTTGGCAGAAGTAGCCATGGCACTTTATATAAAGCAACTCTGGACACTGGTCATATGTTGACTGTAAAATGGTTACGGGTAGGGCTGGTCAAACATAAAAAAGAATTTGCTAGAGAAGTTAAAAGGATTGGTTCTATGAGGCATCCAAACATTGTCCCATTGCTAGCATACTATTGGGGGCCTAGAGAACAAGAGAGGCTTCTTTTAGCTGACTATATACATGGGGACAGCTTGGCTCTTCATCTCTATGAGAGCACACCCCGGAGGCACTCTCCATTATCATTCAGCCAGAGATTAAGAGTTGCTGTTGATGTTGCTCGATGTCTTCTATACCTTCACGATCGAGGGCTTCCCCATGGAAATCTAAAGCCAACGAATATTTTGTTAGCCGGCCCTGAATACAATGCTCGCCTTACTGACTACGGTCTGCACCGGCTGATGACACCAGCTGGAATTGCTGAGCAGATACTAAATCTAGGAGCACTTGGATACCGTGCTCCAGAACTTGCTACTGCATCCAAACCAGTTCCATCCTTTAAGGCCGACGTGTATGCACTTGGTGTGATCTTAATGGAATTATTAACAAGAAAAAGTGCAGGCGACATAATATCAGGGCAATCAGGTGCTGTTGATCTTACAGATTGGGTTAGGCTGTGTGAGCGAGAAGGAAGGGTAATGGACTGTATTGACAGAGACATTACAGGTGGAGAGGAGTCGTCCAAAGAGATGGATGAACTGCTTGCAATATCTCTCAGGTGTATTCTTCCTGTAAATGAGAGGCCTAACATCAGACAAGTTTTTGACGATCTCTGTTCAATATCGGTTTGA 3120 0.4446 MNSKPNCFFFFLSVSLLLLSSPSEPSSPELRSLLEFKKGITLDPLKLLESWNPSSLPGSTVACPRSWRGVLCDDVTGNVTGIVLDRLRLGGELKFHTLLDLKMLKNLSLSGNDFTGRLPPSLGSLSSLQHLDLSHNNFYGPIPARINDLWGLNYLNLSNNQFKGGFPSGLNNLQQLRVLDLHSNQLWAQIGDLLSTLRNVEYVDLSLNQFYGGLSLTVENVSGLANTVHFLNLSHNNLNGHFFESDTIGLFRNLQVLDLTNNSFRGELPSFGSLPSLRVLRLRRNFFFGSVPDELLQNSVSLEELDLSYNGFTGSIAIINSTTLNILNLSSNSLSGSLPASLKRCTVIDLSRNMFSGDISVIQNWEATLEVIDLSSNKLSGSLPSILGSYSKLYTVDLSLNELNGSIPRSLITSSSVTRLNLSGNQFTGPLLLQGSGASELLLMPPYQPMEYLDVSNNSLEGVLPSDISRMGGLKLLNLARNGFSGQLPNELSKLIYLEYLDLSNNKFTGNIPDKLSSSLTVFNVSNNDLSGRVPENLRQFPPSSFQPGNEELILPTNSPETSSVPDNIPDKGRHHSSKGNIRIAIILASVGAAVMIAFVLLAYHRTQLKEFHGRSDFTGQNARRDVKLGGLTRPSLFKFHTNVQPPTTSLSFSNDHLLTSNSRSLSGQSEFITEISEHGVPQGMVATSSASVNPNLMDNPPTSSGRKSSPGSPLSSSPRFIEACEKPVMLDVYSPDRLAGELFFLYSSLAFTAEELSRAPAEVLGRSSHGTLYKATLDTGHMLTVKWLRVGLVKHKKEFAREVKRIGSMRHPNIVPLLAYYWGPREQERLLLADYIHGDSLALHLYESTPRRHSPLSFSQRLRVAVDVARCLLYLHDRGLPHGNLKPTNILLAGPEYNARLTDYGLHRLMTPAGIAEQILNLGALGYRAPELATASKPVPSFKADVYALGVILMELLTRKSAGDIISGQSGAVDLTDWVRLCEREGRVMDCIDRDITGGEESSKEMDELLAISLRCILPVNERPNIRQVFDDLCSISV* 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0526 1039 Gene3D Ribonuclease Inhibitor 227 564 IPR032675 -
Apr1g0526 1039 SUPERFAMILY Protein kinase-like (PK-like) 762 1034 IPR011009 -
Apr1g0526 1039 SUPERFAMILY L domain-like 450 544 - -
Apr1g0526 1039 Gene3D Phosphorylase Kinase; domain 1 743 836 - -
Apr1g0526 1039 SMART LRR_typ_2 495 519 IPR003591 -
Apr1g0526 1039 SMART LRR_typ_2 251 273 IPR003591 -
Apr1g0526 1039 SMART LRR_typ_2 125 149 IPR003591 -
Apr1g0526 1039 SMART LRR_typ_2 274 298 IPR003591 -
Apr1g0526 1039 SMART LRR_typ_2 173 197 IPR003591 -
Apr1g0526 1039 SUPERFAMILY RNI-like 84 430 - -
Apr1g0526 1039 Pfam Leucine Rich Repeat 253 274 IPR001611 GO:0005515
Apr1g0526 1039 MobiDBLite consensus disorder prediction 687 719 - -
Apr1g0526 1039 Pfam Leucine rich repeat N-terminal domain 28 73 IPR013210 -
Apr1g0526 1039 Pfam Protein kinase domain 763 1030 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g0526 1039 ProSiteProfiles Leucine-rich repeat profile. 253 275 IPR001611 GO:0005515
Apr1g0526 1039 PANTHER OS07G0626500 PROTEIN 1 1036 - -
Apr1g0526 1039 Gene3D Ribonuclease Inhibitor 27 222 IPR032675 -
Apr1g0526 1039 MobiDBLite consensus disorder prediction 687 717 - -
Apr1g0526 1039 ProSiteProfiles Protein kinase domain profile. 759 1039 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g0526 1039 PANTHER OS07G0626500 PROTEIN 1 1036 - -
Apr1g0526 1039 Gene3D Transferase(Phosphotransferase) domain 1 838 1039 - -
Apr1g0526 1039 Pfam Leucine Rich repeat 301 317 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0526 Apr-Chr1 6430604 6436696 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0526 1 535 Receptor kinase-like Gene Family AT5G01890 32.663 1.80e-58 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Apr1g0526 Pkinase 1.4e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0526 - - gmx:100802768 1740.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0526 1 6430604 6436696 Apr1g0526 1 6430604 6436696 ECH