Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0502 ATGAAACCTCTGTACAGAAACTCTCTCGTGCTATTTTTCTTCTTCTTCTGCAATCTCTCACACTCACTCAGAGACCCCACTCAGCAGCTCCTCAGCTTCAAAGCTTCTCTCCCCAACCCCTCGGTGCTCCCAAACTGGCTCCCAAACGAAAACGCGTGTTCATTCACTGGAATCACCTGCAACCAAACCCACCTCACTTCCATAGACCTCACCTCCATACCCCTAAGCACAAACCTCTCCATGGTAGGGACCTACCTCCTCACCCTCGACCACCTCGAACTCCTCTCCCTGAAATCCACAAACCTCACGGGCCCAGTTTCAAGCCACACTTCAAAGTGCGCGTCCTCATTAACCACCATAGATCTCTCCCAAAACGCCCTCTCGGGTTCCCTATCGGACATGTCGTTTTTACCCTTCTGCTCTAACCTCCAATCCCTCAACCTCTCAAACAACCTCCTCCAATTCGATTCGCCACGCTGGAGGCTCAACCTCCAAGTCGTGGACCTCTCATACAACAAGATTATAGGGCCAGGGCTTCTCCCTTGGATCCTCAACCAGGACCTCAAACACTTAGCTCTCAAAGGAAACAAAATCACAGGACAAGCCGACTTCACTGCCTGCGCCGTTTTGCAGTACTTGGACCTTTCCTCCAACAACTTCACCGTCCCTATTCCTTCCTTCGGTGAGTGCTCTTCCCTCCAGTACCTCGACCTCTCTGCCAACAAGTACTTCGGCGACATTGCTCTCACTCTCTTCCCTTGCAACCGCCTCGTTTACCTCAACGTCTCTAGCAACCAGTTCTCCGGTCCGCTTCACTCTCTCCCCTCCGCTTCCCTCCAGTTCGTCTACCTCGCCGCCAACCACTTCGACGGCCAGATTTCGCCCTCGCTCGCCGACCTCTGCCCCACTCTCCTTCAACTCGATCTCTCCTCCAACAACCTCACCGGCCCCCTCCCCGGCGCGTTCGGCGCGTGCACCTCTCTAGAATCCTTTGACATATCTAGCAATAAGTTCACTGGCTCGCTGCCGATGGACGTCCTGACTCAGATGAGTAGCCTGAGAGAACTCGCGGTGGCGTTCAACGAGTTCGACGGTCGCCTCCCCGAGTCACTGTCGAAGCTAGTGAGTTTGGAATCGCTGGATCTGAGTTCGAACAACTTCAGCGGGTCAATCCCGGGAACCCTGTGCGTAGATGGTGGGAATAATTTGCGGGAACTGTACCTACAGAATAACCTTTTCACGGGTTATATTCCACCCACGCTCAGCAACTGTTCCAACCTCGTTGCTTTGGACTTGAGCTTCAACTATCTCAAGGGGACTATACCTCCGAGTCTAGGCAGGCTCTCGAAGCTTCGAGATTTAATCATGTGGCTCAACCAGCTCCGCGGAGAGATACCACAGGAACTCATGTATATCACCACTCTCGAGAATTTGATCCTTGACTTTAACGAGTTGAGTGGGAACATTCCCTCTGGACTCGTTAACTGCACCAAATTGAACTGGATCTCCCTCTCCAACAACAGGCTCAGTGGGGACATTCCACCGTGGATTGGCAAGCTTTCCAATCTCGCCATTCTCAAGCTCAGTAACAACTCGTTCTCCGGTCGGATTCCGCCGGAGCTCGGGGATTGTAATAGTTTGATATGGTTGGATCTGAATACGAATTCGTTGACGGGTCCGATTCCGCCGGAGTTGTTCAAGCAATCGGGGAAGATAGCGGTGAATTTCATCAGTGGGAAGACTTATGTTTACATTAAAAATGATGGAAGCAAGGAGTGTCATGGAGCGGGGAATTTGCTGGAGTTTGCGGGGATAAGCCAGCAGCAGCTGAACAGGATTTCCACCAGGAACCCTTGCAATTTCACTAGAGTTTATGGAGGTAAGTTGCAGCCAACGTTTAACCACAATGGTTCTATGATCTTTTTGGATATCTCTCACAACATGTTGTCTGGGAGTATTCCTAAGGAAATTGGGGAGATGTACTATTTGTACATTTTGAATTTAGGGCACAATAATGTATCTGGAAGCATTCCTCAAGAGCTTGGGAAGATGAAGAACCTCAACATCCTTGATCTCTCCAATAATAGGCTGGAAGGCCAAATTCCCCAGAGTTTGACGGGTCTTTCCTTACTCACTGAGATTGACTTGTCCAACAACTATCTTTCCGGGTTGATTCCCGAATCAGGTCAATTTGATACTTTCCCTGCAGCCAGGTTTCAGAACAACTCTGGTCTCTGTGGAGTTCCTCTCTCCCCGTGTGGGACGGACTCCGGAGCTAGTGTAAGTGCCCAACATACCAAGTCTCATAGGAGGCAGGCGTCGCTTGCAGGGAGTGTGGCCATGGGGTTGCTGTTTTCCCTCTTCTGCGTCTTTGGTTTGATTATAATTGCCATTGAGACCAGAAAGAGGAGGAAGAAGAAGGAAGCTGCCCTTGATGCCTACATTGATGGGAACTCTCATTCGGGTACCGCCAATGTGAGCTGGAAGCTCACCAGTGCTCGCGAAGCACTCAGCATTAACCTTGCAACGTTTGAGAAGCCCCTCAGGAAGCTCACTTTTGCGGACCTTCTAGAAGCTACCAATGGCTTTCACAATGATAGTCTTATCGGTTCTGGTGGATTTGGGGATGTTTACAAGGCTCAGTTAAAGGATGGGAGTATTGTGGCCATCAAGAAGCTGATACATGTAAGTGGACAAGGGGACAGGGAATTCACTGCTGAGATGGAAACCATTGGGAAAATTAAGCACAGGAACCTTGTTCCCCTTCTGGGCTACTGCAAGGTTGGGGAGGAAAGGCTCTTGGTTTATGAGTACATGAAATACGGAAGCTTGGAGGATGTTCTGCATGACCAGAAAAAAGCTGGGATCAAGCTGAGCTGGGCAGTGAGGAGGAAAATTGCCATTGGAGCTGCCAGGGGATTGGCTTTTCTTCACCACAATTGTATCCCGCACATCATTCATAGAGACATGAAATCAAGCAATGTGTTGCTTGATGAGAACCTGGAAGCCAGAGTGTCTGATTTTGGAATGGCTAGGCTTATGAGTGCTATGGATACCCATTTGAGTGTGAGCACATTAGCTGGCACCCCAGGGTATGTGCCCCCTGAGTACTATCAGAGCTTTAGATGCTCCACCAAAGGTGATGTCTATAGTTACGGTGTGGTTTTGTTGGAGCTGCTAACCGGGAAGAGGCCTACTGATTCGTCTGATTTTGGTGATAATAATCTTGTTGGATGGGTTAAACAGCATGCCAAGACGAAAATAAGTGATGTTTTTGACCCTGAGCTTATGAAGGAAGACCCCAATTTGGAGATTGAGCTTTTGCAGCACCTAAAGGTTGCATGTTCCTGTTTGGATGATCGACATTGGAGGCGTCCGACGATGATTCAAGTCATGGCAATGTTCAAGGAAATCCAGGCAGGATCTGGGATCGATTCTCAGTCAACCATAGCCACTGAAGACGAAGGTTTCAATGCCGTTGAAATGGTAGAGATGAGCATTAAAGAAGCCCCTGAATTAAGCAAGCATTAG 3531 0.4939 MKPLYRNSLVLFFFFFCNLSHSLRDPTQQLLSFKASLPNPSVLPNWLPNENACSFTGITCNQTHLTSIDLTSIPLSTNLSMVGTYLLTLDHLELLSLKSTNLTGPVSSHTSKCASSLTTIDLSQNALSGSLSDMSFLPFCSNLQSLNLSNNLLQFDSPRWRLNLQVVDLSYNKIIGPGLLPWILNQDLKHLALKGNKITGQADFTACAVLQYLDLSSNNFTVPIPSFGECSSLQYLDLSANKYFGDIALTLFPCNRLVYLNVSSNQFSGPLHSLPSASLQFVYLAANHFDGQISPSLADLCPTLLQLDLSSNNLTGPLPGAFGACTSLESFDISSNKFTGSLPMDVLTQMSSLRELAVAFNEFDGRLPESLSKLVSLESLDLSSNNFSGSIPGTLCVDGGNNLRELYLQNNLFTGYIPPTLSNCSNLVALDLSFNYLKGTIPPSLGRLSKLRDLIMWLNQLRGEIPQELMYITTLENLILDFNELSGNIPSGLVNCTKLNWISLSNNRLSGDIPPWIGKLSNLAILKLSNNSFSGRIPPELGDCNSLIWLDLNTNSLTGPIPPELFKQSGKIAVNFISGKTYVYIKNDGSKECHGAGNLLEFAGISQQQLNRISTRNPCNFTRVYGGKLQPTFNHNGSMIFLDISHNMLSGSIPKEIGEMYYLYILNLGHNNVSGSIPQELGKMKNLNILDLSNNRLEGQIPQSLTGLSLLTEIDLSNNYLSGLIPESGQFDTFPAARFQNNSGLCGVPLSPCGTDSGASVSAQHTKSHRRQASLAGSVAMGLLFSLFCVFGLIIIAIETRKRRKKKEAALDAYIDGNSHSGTANVSWKLTSAREALSINLATFEKPLRKLTFADLLEATNGFHNDSLIGSGGFGDVYKAQLKDGSIVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDQKKAGIKLSWAVRRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSSDFGDNNLVGWVKQHAKTKISDVFDPELMKEDPNLEIELLQHLKVACSCLDDRHWRRPTMIQVMAMFKEIQAGSGIDSQSTIATEDEGFNAVEMVEMSIKEAPELSKH* 1177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0502 1176 SUPERFAMILY RNI-like 278 563 - -
Apr1g0502 1176 SUPERFAMILY L domain-like 25 273 - -
Apr1g0502 1176 Gene3D Phosphorylase Kinase; domain 1 823 938 - -
Apr1g0502 1176 ProSitePatterns Protein kinases ATP-binding region signature. 869 892 IPR017441 GO:0005524
Apr1g0502 1176 ProSiteProfiles Protein kinase domain profile. 863 1138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g0502 1176 Gene3D Transferase(Phosphotransferase) domain 1 939 1140 - -
Apr1g0502 1176 ProSiteProfiles Leucine-rich repeat profile. 116 138 IPR001611 GO:0005515
Apr1g0502 1176 SMART LRR_typ_2 374 398 IPR003591 -
Apr1g0502 1176 SMART LRR_typ_2 402 424 IPR003591 -
Apr1g0502 1176 SMART LRR_typ_2 684 707 IPR003591 -
Apr1g0502 1176 SMART LRR_typ_2 708 731 IPR003591 -
Apr1g0502 1176 SMART LRR_typ_2 301 324 IPR003591 -
Apr1g0502 1176 SMART LRR_typ_2 520 544 IPR003591 -
Apr1g0502 1176 Pfam Leucine Rich Repeat 402 424 IPR001611 GO:0005515
Apr1g0502 1176 PRINTS Leucine-rich repeat signature 304 317 - -
Apr1g0502 1176 PRINTS Leucine-rich repeat signature 684 697 - -
Apr1g0502 1176 Pfam Protein kinase domain 863 1133 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g0502 1176 Pfam Leucine rich repeat N-terminal domain 28 61 IPR013210 -
Apr1g0502 1176 SUPERFAMILY L domain-like 631 754 - -
Apr1g0502 1176 Gene3D - 575 635 - -
Apr1g0502 1176 CDD STKc_IRAK 869 1138 - -
Apr1g0502 1176 PANTHER SYSTEMIN RECEPTOR SR160 14 1150 - -
Apr1g0502 1176 Pfam Leucine Rich repeat 301 316 IPR001611 GO:0005515
Apr1g0502 1176 Gene3D Ribonuclease Inhibitor 30 753 IPR032675 -
Apr1g0502 1176 SUPERFAMILY Protein kinase-like (PK-like) 849 1140 IPR011009 -
Apr1g0502 1176 Pfam Leucine rich repeat 327 387 IPR001611 GO:0005515
Apr1g0502 1176 Pfam Leucine rich repeat 663 721 IPR001611 GO:0005515
Apr1g0502 1176 Pfam Brassinosteroid receptor island domain 570 634 IPR045381 -
Apr1g0502 1176 SMART serkin_6 863 1135 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr1g0502 1176 ProSitePatterns Serine/Threonine protein kinases active-site signature. 985 997 IPR008271 GO:0004672|GO:0006468
Apr1g0502 1176 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 14 1150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0502 Apr-Chr1 6171971 6176320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0502 20 1172 Receptor kinase-like Gene Family AT4G39400 69.007 0.0 1540
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Apr1g0502 Pkinase 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0502 K13415 - gmx:100799772 1956.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0502 1 6171971 6176320 Apr1g0502 1 6171971 6176320 ECH