Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0496 ATGCTATTTCCAGGTATGAATAGGGAGAGAGAGATGTCTGCTATGGTCTCAGCTTTGGCTCACGTGGTCTCTGGAGATGTGCCAAGCGGTGATTCTCATCAACCCAGTGCTCTTGTCGATGATGCTATTGCTATTGTTTCCCCAAACATGCCTTCTTCATCTCTCAAGAGAAGTAGGGAACATGACTCTTCTTTCTCACACCCCGCTTCATCCCTTGCTATGCCAACTACAACTGCAGAATGTTCCAACAACATGACAAGTAGCATAATAACAGAAACGAGGGAAATGGTGAATGCTGTGTACGAATACAGAACAACAGAGAATGTGGTGAGGGATCAAGGAAGGAGAAAATACAGAGGAGTGAGACAGAGGCCATGGGGAAAATGGGCTGCGGAGATTAGAGATCCATTCAAAGCAGCGAGGGTTTGGTTAGGGACATTTGACACAGCGGAGGCAGCAGCAAGAGCATACGATGAAGCTGCTTTGCGTTTCAGAGGGAACAAAGCGAAACTTAACTTCCCTGAGAATGTTACTCTCCGACAACCTCAATGGAACCTTTCCAATTCTTCTACTTCTATGGTATCTGTTACAACCTCCACTGACCCAGTTGTTCATACTGAAGCTCTTCCCCCTTCTCAGGCTTCCAGCGATTTCTATGACTATTTTCAGCTCTCTGGGTTTCCCATGAACCTTTATGATGATCGCATGTTAATGGCTTCTACCATGGCTTCTCATGTTCAATCTTCGTCGTCGCCGTCAACCTCGTCTTCTTCTTCTTCTTCTGCGTTTGGTTTCTCTATAACTTCTCCGCAGGCCACTTCATTTTCTTCATTGTATTCTACGCAGTTGCCGCCATGGTCAGCTTCTGGTCATAGTTCTTCTTCCTCGGGATAA 894 0.4597 MLFPGMNREREMSAMVSALAHVVSGDVPSGDSHQPSALVDDAIAIVSPNMPSSSLKRSREHDSSFSHPASSLAMPTTTAECSNNMTSSIITETREMVNAVYEYRTTENVVRDQGRRKYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFPENVTLRQPQWNLSNSSTSMVSVTTSTDPVVHTEALPPSQASSDFYDYFQLSGFPMNLYDDRMLMASTMASHVQSSSSPSTSSSSSSSAFGFSITSPQATSFSSLYSTQLPPWSASGHSSSSSG* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0496 297 MobiDBLite consensus disorder prediction 50 78 - -
Apr1g0496 297 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF110 7 295 - -
Apr1g0496 297 ProSiteProfiles AP2/ERF domain profile. 117 174 IPR001471 GO:0003700|GO:0006355
Apr1g0496 297 Gene3D AP2/ERF domain 116 176 IPR036955 GO:0003700|GO:0006355
Apr1g0496 297 PANTHER DNA-BINDING DOMAIN 7 295 IPR044808 GO:0003700|GO:0009873
Apr1g0496 297 SUPERFAMILY DNA-binding domain 117 175 IPR016177 GO:0003677
Apr1g0496 297 CDD AP2 117 176 IPR001471 GO:0003700|GO:0006355
Apr1g0496 297 Pfam AP2 domain 117 166 IPR001471 GO:0003700|GO:0006355
Apr1g0496 297 SMART rav1_2 117 180 IPR001471 GO:0003700|GO:0006355
Apr1g0496 297 PRINTS Ethylene responsive element binding protein signature 118 129 IPR001471 GO:0003700|GO:0006355
Apr1g0496 297 PRINTS Ethylene responsive element binding protein signature 140 156 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0496 Apr-Chr1 6091462 6092644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0496 2 214 AP2-EREBP Transcription Factor Family AT5G64750 46.188 1.19e-37 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Apr1g0496 AP2 3.3e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0496 - - gmx:100796247 313.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0496 1 6091462 6092644 Apr1g0496 1 6091462 6092644 ECH